Popular repositories Loading

1. topic-functional-annotation topic-functional-annotation Public

   Forked from biovcnet/topic-functional-annotation

   A repository for the lessons and notebooks used for Binder tutorials

   Shell

2. built-iab built-iab Public

   Forked from applied-bioinformatics/built-iab

   Repository for An Introduction to Applied Bioinformatics built notebooks.

   Jupyter Notebook

3. Fayetteville-Green-Lake-sediment-trap-amplicon-processing Fayetteville-Green-Lake-sediment-trap-amplicon-processing Public

   UNIX and qiime2 pipeline to process 250 bp x 2 paired end reads

   Jupyter Notebook

4. fluorescence-in-situ-hybridization-probe-analyses fluorescence-in-situ-hybridization-probe-analyses Public

   Determines the specificity and coverage of fluorescence in situ hybridization probes with competitor probes accounted for (if applicable). Designed to analyze Asgard Archaea probes but may be used …

   Python

5. amplicon-metagenome-metadata-preprocessing amplicon-metagenome-metadata-preprocessing Public

   Cleans up and converts continuous metadata into categorical metadata for more meaningful correlation analyses and beta diversity visualizations. Outputs include cleaned continuous and categorical m…

   Python

6. amplicon-biostatistics amplicon-biostatistics Public

   alpha diversity, beta diversity, and other biostatistics for amplicon data

   Python