Add NestedToMCMCAdapter to enable compatibility with MCMC (#2391) #2400
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Description
This PR addresses issue #2391 by adding the
NestedToMCMCAdapter
class to convertNestedSampler
objects into an MCMC-compatible interface. This change ensures compatibility with tools like ArviZ for posterior analysis and visualization.Key Changes:
NestedToMCMCAdapter
to reshape posterior samples fromNestedSampler
into a chain-and-draw structure expected by MCMC workflows.get_samples
method to provide reshaped or flattened posterior samples.get_extra_fields
method to simulate dummy sampling statistics such as acceptance probabilities, step sizes, and number of steps.data
,labels
) for models requiring input parameters.This update allows seamless integration of
NestedSampler
results into ArviZ workflows and enhances usability for downstream analysis.Checklist
📚 Documentation preview 📚: https://arviz--2400.org.readthedocs.build/en/2400/