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Update links to paper
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@BenjaminDoran
BenjaminDoran committed Jan 17, 2025
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5 changes: 1 addition & 4 deletions README.md
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This project reproduces results from:

published version: [Subspecies phylogeny in the human gut revealed by coevolutionary constraints across the bacterial kingdom]

preprint: [An evolution-based framework for describing human gut bacteria
](https://www.biorxiv.org/content/10.1101/2023.12.04.569969v1)
[Subspecies phylogeny in the human gut revealed by coevolutionary constraints across the bacterial kingdom](https://doi.org/10.1016/j.cels.2024.12.008)

To (locally) reproduce this project, do the following:

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5 changes: 1 addition & 4 deletions notebooks/index.qmd
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Expand Up @@ -10,10 +10,7 @@ to make a reproducible scientific project named
This project reproduces results from:

published version: [Subspecies phylogeny in the human gut revealed by coevolutionary constraints across the bacterial kingdom]()

preprint: [An evolution-based framework for describing human gut bacteria
](https://www.biorxiv.org/content/10.1101/2023.12.04.569969v1)
[Subspecies phylogeny in the human gut revealed by coevolutionary constraints across the bacterial kingdom](https://doi.org/10.1016/j.cels.2024.12.008)

To (locally) reproduce this project, do the following:

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