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  1. refresh-bio/Whisper refresh-bio/Whisper Public

    C++ 24 4

  2. refresh-bio/FAMSA refresh-bio/FAMSA Public

    Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

    C 138 26

  3. refresh-bio/kmer-db refresh-bio/kmer-db Public

    Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).

    C++ 80 16

  4. adaa-polsl/RuleKit adaa-polsl/RuleKit Public

    Comprehensive suite for rule-based learning

    Java 114 7

  5. refresh-bio/colord refresh-bio/colord Public

    A versatile compressor of third generation sequencing reads.

    C++ 46 11

  6. refresh-bio/PHIST refresh-bio/PHIST Public

    Phage-Host Interaction Search Tool

    C++ 26 1