-
Notifications
You must be signed in to change notification settings - Fork 131
Issues: ablab/spades
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
No error code metaspades just terminate after 13 hours of running kmer counting
outdated
Issues with legacy SPAdes versions
#1317
opened Jun 20, 2024 by
stopguessingwho1am
1 task done
How to use spades operate a fasta file, especially simulated reads in fasta format from badread?
#1305
opened May 22, 2024 by
SoSongzhi
1 task done
Stack trace - The program was terminated by segmentation fault
#1291
opened May 13, 2024 by
emilyn16
1 task done
spades-core: /opt/conda/conda-bld/spades_1664217775513/work/src/project/spades/main.cpp:101: int main(int, char**): Assertion `cfg::get().K >= runtime_k::MIN_K && cfg::get().K < runtime_k::MAX_K' failed.finished abnormally, OS return value: -6
#1284
opened Apr 29, 2024 by
GuillaumeDore11
1 task done
== Error == finished abnormally, OS return value: -11
io
Input / output (e.g. due to disk storage) errors
#1277
opened Apr 16, 2024 by
efe3506
1 task done
I keep runnning into "finished abnormally, err code: -11"
outdated
Issues with legacy SPAdes versions
wsl
Issues with unsupported WSL/WSL2
#1267
opened Mar 28, 2024 by
Wanjofu
1 task done
== Error == system call for: "['/usr/lib/spades/bin/spades-core', '/home/ifb/rnaSPAdemount/K55/configs/config.info', '/home/ifb/rnaSPAdemount/K55/configs/mda_mode.info', '/home/ifb/rnaSPAdemount/K55/configs/rna_mode.info']" finished abnormally, err code: -6
io
Input / output (e.g. due to disk storage) errors
#1262
opened Mar 22, 2024 by
adsas45
1 task done
Error == system call for: ....." finished abnormally, OS return value: -6 None when running rnaspades
#1255
opened Mar 7, 2024 by
komorn
1 task done
The number of contigs generated is significantly lower than expected
#1252
opened Mar 1, 2024 by
liusihang
1 task done
Exception caught Cannot open file XXX/.bin_reads/paired_0.off': iostream error
io
Input / output (e.g. due to disk storage) errors
#1250
opened Feb 27, 2024 by
gorfol
1 task done
finished abnormally, OS return value: -11 and source code intasll error
#1249
opened Feb 27, 2024 by
2110537
1 task done
getting error while running spades.py error : finished abnormally, OS return value: -11
#1248
opened Feb 21, 2024 by
rishidash12
1 task done
Spades not showing any output after starting processing read Two
#1242
opened Feb 8, 2024 by
Shaileshdesai76
1 task done
Is repeat resolution necessary in large-scale metagenomics?
#1241
opened Feb 3, 2024 by
yqy6611
1 task done
spades-core terminated automatically during k-mer counting without errors
#1237
opened Jan 22, 2024 by
yqy6611
1 task done
Error during --test execution: The program was terminated by segmentation fault
#1230
opened Jan 2, 2024 by
lucolotto
1 task done
Error:spades-hammer ,finished abnormally, OS return value: -9
#1226
opened Dec 21, 2023 by
JianxiongZeng
1 task done
Previous Next
ProTip!
Mix and match filters to narrow down what you’re looking for.