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Ziaeemehr/README.md

👋 Welcome to My GitHub!

I'm Abolfazl Ziaeemehr, highly passionate about neural dynamics, complex systems, and simulations. As a computational neuroscientist, I specialize in developing Bayesian methods to study whole-brain network dynamics. I also have expertise in deep learning techniques, which I've applied to analyze EEG/MEG/fMRI data from both rats and humans. Below, you can explore my projects, research, and contributions.

My GitHub Stats

Github Stats By Mehmet


My CV.


📚 Research Papers Repositories:

  • SBI_VBM
    • Hashemi, M., Ziaeemehr, A., Woodman, M.M., Fousek, J., Petkoski, S. and Jirsa, V., 2024. Simulation-based inference on virtual brain models of disorders. Machine Learning: Science and Technology.
  • Frontiers 2021
    • Ziaeemehr, A. and Valizadeh, A., 2021. Frequency-resolved functional connectivity: role of delay and the strength of connections. Frontiers in Neural Circuits, 15, p.608655.
  • Neural Network 2020
    • Ziaeemehr, A., Zarei, M., Valizadeh, A., andMirasso, C.R. (2020). Frequency-dependentorganization of the brain’s functionalnetwork through delayed-interactions.Neural Network. 132, 155–165.44.
  • Scientific Reports 2020
    • Ziaeemehr, A., Zarei, M. and Sheshbolouki, A., 2020. Emergence of global synchronization in directed excitatory networks of type I neurons. Scientific reports, 10(1), p.3306.

💻 Books Code & Packages

  • netsci: Network Science by Albert-László, 2016
  • spikes: Spikes, decisions, and actions, Wilson, 1999
  • jitcsim : Simulation of complex network dynamics with Ordinary/Delay/Stochastic differential equations (just-in-time compilation).
  • mndynamics Stanalone python package for An Introduction to Modeling Neuronal Dynamics - Christoph Borgers.

🛠️ Workshop Repositories


🌐 Connect With Me

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  1. ITNG/ModelingNeuralDynamics ITNG/ModelingNeuralDynamics Public

    An Introduction to Modeling Neuronal Dynamics - Borgers in python, Single Neuron Models, Mathematical Modeling, Computational Neuroscience, Hodgkin-Huxley Equations, Differential Equations, Brain R…

    MATLAB 40 17

  2. ITNG/ziaeeNN2020 ITNG/ziaeeNN2020 Public

    Frequency-dependent organization of the brain’s functional network through delayed-interactions, J. Neural Network 2020

    Python 3 1

  3. mndynamics mndynamics Public

    A python package for An Introduction to Modeling Neuronal Dynamics by Christoph Borgers

    Jupyter Notebook 9

  4. netsci netsci Public

    Network Science by Albert-László Barabási notes

    Python 2

  5. spikes spikes Public

    Python/JAX code for Spikes, decisions, and actions, Wilson, 1999

    Python 2