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Empty "reactions.tsv" output #122

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LeMon2582 opened this issue Feb 11, 2025 · 1 comment
Open

Empty "reactions.tsv" output #122

LeMon2582 opened this issue Feb 11, 2025 · 1 comment

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@LeMon2582
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I just installed Compass following the guide and, when testing with the example dataset (tsv format) the output "reactions.tsv" file contains all columns (samples) but no lines (reactions).
I used the default model, and when using the --list-reactions option I do see all the reactions of the model...
Any idea?

@ZhejiangZhe123
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I am experiencing the same issue with Compass. When testing with the example dataset in TSV format, the "reactions.tsv" file contains all the columns (samples) but no rows (reactions). Have you found a solution to this problem? I'd appreciate any suggestions.

Thanks in advance!

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