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j-berg committed Jun 29, 2024
1 parent d9d896c commit 436065c
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1 change: 0 additions & 1 deletion requirements.yml
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Expand Up @@ -13,7 +13,6 @@ dependencies:
- conda-forge::numpy>=1.16.0
- conda-forge::scipy
- conda-forge::r-base>=4.0.0
- conda-forge::openssl
- fastp
- umi_tools
- STAR>=2.5.1
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2 changes: 1 addition & 1 deletion xpresspipe/Rmetagene.r
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Expand Up @@ -46,8 +46,8 @@ packages <- c("Rsamtools", "GenomicAlignments")
# Install each package if missing
for (pkg in packages) {
install_if_missing(pkg)
library(pkg)
}
library(GenomicAlignments)

# Set globals
chromosome <- 'chromosome'
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