Feature: Enhanced Protein Visualization #14

	---
	name: CI

	on:
	push:
	branches: [main, feature/*]
	pull_request:
	branches: [main]

	jobs:
	test:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v2

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.10.13'

	- name: Install system dependencies
	run: \|
	sudo apt-get update
	sudo apt-get install -y \
	swig \
	cmake \
	libopenmm-dev \
	dssp \
	build-essential \
	curl \
	git \
	python3-dev \
	gcc \
	gfortran \
	libblas-dev \
	liblapack-dev \
	libhdf5-dev \
	libnetcdf-dev

	- name: Install Python dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install pytest pytest-cov
	pip install -r requirements.txt

	- name: Run tests
	run: \|
	cd tests
	python -m pytest \
	test_dynamics.py \
	test_mutation_analysis.py \
	-v --cov=../models

	- name: Check code style
	run: \|
	pip install flake8
	flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
	flake8 . --count --exit-zero --max-complexity=10 \
	--max-line-length=80 --statistics

	build:
	runs-on: ubuntu-latest
	needs: test
	if: github.event_name == 'push' && github.ref == 'refs/heads/main'
	steps:
	- uses: actions/checkout@v2

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.10.13'

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r requirements.txt
	pip install build wheel

	- name: Build package
	run: \|
	python -m build
	python setup.py bdist_wheel

	- name: Upload artifacts
	uses: actions/upload-artifact@v2
	with:
	name: dist
	path: dist/

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