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Add differential expression #246

Add differential expression

Add differential expression #246

Triggered via pull request October 31, 2024 22:16
Status Failure
Total duration 16m 50s
Artifacts 5

R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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15 errors and 15 warnings
macos-latest (release)
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘DESeq2’
macos-latest (release)
R CMD check found ERRORs
macos-latest (release)
Process completed with exit code 1.
windows-latest (release)
Namespace dependency missing from DESCRIPTION Imports/Depends entries: 'DESeq2'
windows-latest (release)
R CMD check found ERRORs
windows-latest (release)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘DESeq2’
ubuntu-latest (oldrel-1)
R CMD check found ERRORs
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (release)
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘DESeq2’
ubuntu-latest (release)
R CMD check found ERRORs
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (devel)
Namespace dependency missing from DESCRIPTION Imports/Depends entries: ‘DESeq2’
ubuntu-latest (devel)
R CMD check found ERRORs
ubuntu-latest (devel)
Process completed with exit code 1.
macos-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest (release)
/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpfMsSsQ/Rbuild10885cae533f/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
macos-latest (release)
/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpfMsSsQ/Rbuild10885cae533f/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
windows-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpIvxhOy/Rbuild49c72333fbc/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpIvxhOy/Rbuild49c72333fbc/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (oldrel-1)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (release)
/tmp/RtmpCLNCpi/Rbuild19337705e91e/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (release)
/tmp/RtmpCLNCpi/Rbuild19337705e91e/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (devel)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (devel)
/tmp/Rtmpgf61ps/Rbuild594c5b1c16b1/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (devel)
/tmp/Rtmpgf61ps/Rbuild594c5b1c16b1/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"

Artifacts

Produced during runtime
Name Size
Linux-X64-rdevel-2-results
22.9 MB
Linux-X64-roldrel-1-4-results
22.9 MB
Linux-X64-rrelease-3-results
22.9 MB
Windows-X64-rrelease-1-results
22.9 MB
macOS-ARM64-rrelease-0-results
22.9 MB