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Import mbio changes #239

Import mbio changes

Import mbio changes #239

Triggered via pull request October 18, 2024 20:16
Status Failure
Total duration 19m 31s
Artifacts 5

R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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15 errors and 50 warnings
macos-latest (release)
R CMD check found WARNINGs
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
Elements must be named
ubuntu-latest (release)
R CMD check found WARNINGs
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
Elements must be named
ubuntu-latest (oldrel-1)
R CMD check found WARNINGs
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
Elements must be named
windows-latest (release)
R CMD check found WARNINGs
windows-latest (release)
Process completed with exit code 1.
windows-latest (release)
Elements must be named
ubuntu-latest (devel)
R CMD check found WARNINGs
ubuntu-latest (devel)
Process completed with exit code 1.
ubuntu-latest (devel)
Elements must be named
macos-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest (release)
/private/var/folders/q5/6nls1_g145s2fl1lbvx2zby40000gn/T/RtmpAd2uQa/Rbuild114051e596f/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
macos-latest (release)
/private/var/folders/q5/6nls1_g145s2fl1lbvx2zby40000gn/T/RtmpAd2uQa/Rbuild114051e596f/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
macos-latest (release)
Found the following significant warnings:
macos-latest (release)
'::' or ':::' import not declared from: ‘scales’
macos-latest (release)
naToZero:
macos-latest (release)
Foreign function calls to a different package:
macos-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
macos-latest (release)
Undocumented code objects:
macos-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
ubuntu-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (release)
/tmp/Rtmpq8iOp7/Rbuild187b27dec336/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (release)
/tmp/Rtmpq8iOp7/Rbuild187b27dec336/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (release)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (release)
naToZero:
ubuntu-latest (release)
Foreign function calls to a different package:
ubuntu-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (release)
Undocumented code objects:
ubuntu-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
ubuntu-latest (release)
Undocumented arguments in Rd file 'correlation.Rd'
ubuntu-latest (oldrel-1)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (oldrel-1)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (oldrel-1)
naToZero:
ubuntu-latest (oldrel-1)
Foreign function calls to a different package:
ubuntu-latest (oldrel-1)
prepare_Rd: megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (oldrel-1)
Undocumented code objects:
ubuntu-latest (oldrel-1)
S4 class codoc mismatches from documentation object 'Megastudy-class':
ubuntu-latest (oldrel-1)
Undocumented arguments in documentation object 'correlation'
windows-latest (release)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpAjJRnM/Rbuild184c6abac96/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/RtmpAjJRnM/Rbuild184c6abac96/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
windows-latest (release)
'::' or ':::' import not declared from: 'scales'
windows-latest (release)
naToZero:
windows-latest (release)
Foreign function calls to a different package:
windows-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
windows-latest (release)
Undocumented code objects:
windows-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
windows-latest (release)
Undocumented arguments in Rd file 'correlation.Rd'
ubuntu-latest (devel)
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest (devel)
/tmp/Rtmpkq1Frp/Rbuild58d03c49c0a1/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (devel)
/tmp/Rtmpkq1Frp/Rbuild58d03c49c0a1/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (devel)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (devel)
naToZero:
ubuntu-latest (devel)
Foreign function calls to a different package:
ubuntu-latest (devel)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (devel)
/home/runner/work/veupathUtils/veupathUtils/check/veupathUtils.Rcheck/00_pkg_src/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (devel)
Undocumented code objects:
ubuntu-latest (devel)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':

Artifacts

Produced during runtime
Name Size
Linux-X64-rdevel-2-results
35.6 MB
Linux-X64-roldrel-1-4-results
35.5 MB
Linux-X64-rrelease-3-results
35.5 MB
Windows-X64-rrelease-1-results
34.5 MB
macOS-ARM64-rrelease-0-results
34.5 MB