Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
so a thought ive been playing w recently.. dan has been talking about adding support for antimicrobial and viral stuffs to the workflow, and that seemed expensive bc we didnt have anyone to develop them. but then i see things that could get us that data just sitting in nf-core. seems worth trying to incorporate if its fairly low cost id think, so here is a draft of what that might look like. its pretty rough, lots of places i put a skeleton of a thing w a major TODO, but should be enough i hope to talk around and get feedback on the overall strategy before continuing.
depends on VEuPathDB/ReFlow#4
wip