Merge pull request #291 from tbohn/fix_atbd_ref

Merged into master, will update develop manually

docs/Documentation/References.md

@@ -1,9 +1,5 @@
 # VIC Model References
 
-## A comprehensive description of the model as of release 4.1:
-
-Gao, H., Q. Tang, X. Shi, C. Zhu, T. J. Bohn, F. Su, J. Sheffield, M. Pan, D. P. Lettenmaier, and E. F. Wood, 2010: [Water Budget Record from Variable Infiltration Capacity (VIC) Model](http://www.hydro.washington.edu/SurfaceWaterGroup/Publications/Water_Cycle_MEaSUREs_ATBD_VICmodel_submit.doc). In _Algorithm Theoretical Basis Document for Terrestrial Water Cycle Data Records_ (unpublished).
-
 ## Primary Historical Reference
 
 Liang, X., D. P. Lettenmaier, E. F. Wood, and S. J. Burges, 1994: A Simple hydrologically Based Model of Land Surface Water and Energy Fluxes for GSMs, _J. Geophys. Res._, **99**(D7), 14,415-14,428.
@@ -28,6 +24,8 @@ Cherkauer, K. A. and D. P. Lettenmaier, 1999: Hydrologic effects of frozen soils
 
 Cherkauer, K. A., L. C. Bowling, and D. P. Lettenmaier, 2003: Variable infiltration capacity cold land process model updates, _Global and Planetary Change_, **38**, 151-159.
 
+Gao, H., Q. Tang, X. Shi, C. Zhu, T. J. Bohn, F. Su, J. Sheffield, M. Pan, D. P. Lettenmaier, and E. F. Wood, 2010: [Water Budget Record from Variable Infiltration Capacity (VIC) Model](http://www.hydro.washington.edu/SurfaceWaterGroup/Publications/Water_Cycle_MEaSUREs_ATBD_VICmodel_submit.doc). In _Algorithm Theoretical Basis Document for Terrestrial Water Cycle Data Records_ (unpublished).
+
 Liang, X., 1994: A Two-Layer Variable Infiltration Capacity Land Surface Representation for General Circulation Models, _Water Resour. Series_, **TR140**, 208 pp., Univ. of Washington, Seattle.
 
 Liang, X., D. P. Lettenmaier, E. F. Wood, 1996: One-dimensional Statistical Dynamic Representation of Subgrid Spatial Variability of Precipitation in the Two-Layer Variable Infiltration Capacity Model, _J. Geophys. Res._, **101**(D16) 21,403-21,422.

docs/index.md

@@ -2,7 +2,7 @@
 
 [![Build Status](https://travis-ci.org/UW-Hydro/VIC.png?branch=develop)](https://travis-ci.org/UW-Hydro/VIC) [![VIC Users Listserve](https://img.shields.io/badge/VIC%20Users%20Listserve-Active-blue.svg)](https://mailman.u.washington.edu/mailman/listinfo/vic_users) [![Join the chat at https://gitter.im/UW-Hydro/VIC](https://badges.gitter.im/Join%20Chat.svg)](https://gitter.im/UW-Hydro/VIC?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge) [![GitHub license](https://img.shields.io/badge/license-GPLv2-blue.svg)](https://raw.githubusercontent.com/UW-Hydro/VIC/master/LICENSE.txt) [![Documentation Status](https://readthedocs.org/projects/vic/badge/?version=latest)](http://vic.readthedocs.org/en/latest/) [![DOI](https://zenodo.org/badge/doi/10.5281/zenodo.22307.svg)](http://dx.doi.org/10.5281/zenodo.22307)
 
-VIC ([Liang et al., 1994](Documentation/References.md)) is a macroscale hydrologic model that solves full water and energy balances, originally developed by Xu Liang at the University of Washington.  VIC is a research model and in its various forms it has been applied to most of the major river basins around the world, as well as [globally](links.md). The VIC model is distributed under the [GNU GPL v2.0](http://www.gnu.org/licenses/gpl-2.0.html) license. If you make use of this model, please acknowledge the appropriate references listed on the [references](Documentation/References.md) page.
+VIC ([Liang et al., 1994](Documentation/References.md)) is a macroscale hydrologic model that solves full water and energy balances, originally developed by Xu Liang at the University of Washington.  VIC is a research model and in its various forms it has been applied to most of the major river basins around the world, as well as [globally](links.md). The VIC model is distributed under the [GNU GPL v2.0](http://www.gnu.org/licenses/gpl-2.0.html) license. If you make use of this model, please acknowledge the appropriate references listed on the [references](Documentation/References.md) page. These should include [Liang et al., 1994](Documentation/References.md) plus any references relevant to the features you are using, which are cited in the feature descriptions on the [Model Overview](Overview/ModelOverview.md) page.
 
 Development and maintenance of the current official version of the VIC model is led by the [UW Hydro | Computational Hydrology group](http://www.hydro.washington.edu) in the [Department of Civil and Environmental Engineering](http://www.ce.washington.edu) at the [University of Washington](http://www.washington.edu). Every new application addresses new problems and conditions that the model may not currently be able to handle, and as such the model is always under development. The VIC model is an open source development project, which means that contributions are welcome, including to the VIC documentation. 
 

readme.md

@@ -25,4 +25,4 @@ VIC is a research model developed by graduate students, post-docs and research s
 
 While we would like to hear about your particular application (especially a copy of any published paper), we cannot give you individual support in setting up and running the model. The [VIC documentation website](http://vic.readthedocs.org) includes reasonably complete instructions on how to run the model, as well as the opportunity to sign up for the VIC Users Email List. The [VIC listserve](https://mailman.u.washington.edu/mailman/listinfo/vic_users) should be used for questions about model setup and application. It is basically VIC users helping other VIC users. All other exchanges about VIC source code are managed through the [VIC github page](https://github.com/UW-Hydro/VIC).
 
-If you make use of this model, please acknowledge the appropriate references listed on the [references page](http://vic.readthedocs.org/en/latest/Documentation/References/).
+If you make use of this model, please acknowledge [Liang et al. [1994]](http://dx.doi.org/10.1029/94jd00483) plus any other references appropriate to the features you used that are cited in the [model overview](http://vic.readthedocs.org/en/latest/Overview/ModelOverview/).