Revert "add function for resolving a single bwt position to global po… #143
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build and Test | |
| on: [push, pull_request] | |
| jobs: | |
| check-build: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: traviswheelerlab/awfmindex-build | |
| volumes: | |
| - ${{ github.workspace }}:/code | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - run: git submodule update --init | |
| - run: cmake . | |
| - run: make | |
| check-build-mac: | |
| runs-on: macos-11 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - run: git submodule update --init | |
| - run: cmake -DCMAKE_C_COMPILER=`which gcc-10` . | |
| - run: make || true | |
| check-legacy-build: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: traviswheelerlab/awfmindex-build | |
| volumes: | |
| - ${{ github.workspace }}:/code | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - run: make -f Makefile_legacy | |
| - run: make -f Makefile_legacy static | |
| check-legacy-build-mac: | |
| runs-on: macos-11 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - run: make -f Makefile_legacy CC=`which gcc-10` | |
| - run: make -f Makefile_legacy static CC=`which gcc-10` | |
| check-format: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: traviswheelerlab/awfmindex-build | |
| volumes: | |
| - ${{ github.workspace }}:/code | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - run: ./tool/check-format.sh || true |