v1.0.7

MyoFInDer 1.0.7

This release brings major adjustments to the available settings.

It renames:

• Nuclei Threshold to Minimum nucleus intensity
• Fiber Threshold to Minimum fiber intensity

The range of Fiber Threshold is also changed from 0-160 to 0-100.

It adds:

• Maximum fiber intensity, similar to Minimum fiber intensity but setting a maximum threshold
• Maximum nucleus intensity, similar to Minimum nucleus intensity but setting a maximum threshold

It replaces:

• Small Objects threshold with Minimum nucleus diameter (px). Instead of driving directly the minimum area a detected nucleus must possess, it drives the minimum "average" diameter it must have, in pixels. This change was brought in response to #16.

In addition, the documentation about the available settings was also updated, and other minor documentation improvements were brought.

Finally, the settings.pickle files storing the last used setting values are now forward- and backward compatible starting from this version.

Merged pull requests

• Improve the available settings by @WeisLeDocto in #23
• Add automated workflows by @WeisLeDocto in #24
• Documentation improvement by @WeisLeDocto in #25
• Release version 1.0.7 of MyoFInDer by @WeisLeDocto in #26

Full Changelog: v1.0.6...v1.0.7

The tarball and the wheel are available on PyPI