Adapt and build intermediate images

1-intermediate-images/pyod/Dockerfile

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+FROM ghcr.io/timeeval/python3-base:0.3.0
+
+LABEL maintainer="[email protected]"
+
+# install pyod library and cleanup afterwards
+RUN set -eux; \
+    pip install --no-cache-dir pyod==0.9.2; \
+    find /usr/local -depth \
+		\( \
+			\( -type d -a \( -name test -o -name tests -o -name idle_test \) \) \
+			-o \
+			\( -type f -a \( -name '*.pyc' -o -name '*.pyo' \) \) \
+		\) -exec rm -rf '{}' +; \
+    rm -rf /tmp/* /var/tmp/* ~/.cache/pip

1-intermediate-images/pyod/LICENSE

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+MIT License
+
+Copyright (c) 2020-2023 Phillip Wenig and Sebastian Schmidl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

1-intermediate-images/pyod/version.txt

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+0.3.0

1-intermediate-images/python3-torch/Dockerfile

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+FROM ghcr.io/timeeval/python3-base:0.3.0
+
+LABEL maintainer="[email protected]"
+
+RUN pip install --no-cache-dir torch==1.7.1

1-intermediate-images/python3-torch/LICENSE

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+MIT License
+
+Copyright (c) 2020-2023 Phillip Wenig and Sebastian Schmidl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

1-intermediate-images/python3-torch/version.txt

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+0.3.0

1-intermediate-images/timeeval-test-algorithm/Dockerfile

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+FROM ghcr.io/timeeval/python3-base:0.3.0
+
+LABEL maintainer="[email protected]"
+
+ENV ALGORITHM_MAIN=/app/algorithm.py
+
+COPY manifest.json /app/
+COPY algorithm.py /app/

1-intermediate-images/timeeval-test-algorithm/LICENSE

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+MIT License
+
+Copyright (c) 2020-2023 Phillip Wenig and Sebastian Schmidl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

1-intermediate-images/timeeval-test-algorithm/algorithm.py

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+import numpy as np
+import pandas as pd
+import json
+import time
+import argparse
+import sys
+
+
+class AlgorithmArgs(argparse.Namespace):
+    @property
+    def ts(self) -> np.ndarray:
+        dataset = pd.read_csv(self.dataInput)
+        return dataset.values[:, 1:-1]
+
+    @staticmethod
+    def from_sys_args() -> 'AlgorithmArgs':
+        args = json.loads(sys.argv[1])
+        return AlgorithmArgs(**args)
+
+
+def main():
+    args = AlgorithmArgs.from_sys_args()
+    will_raise = args.customParameters.get("raise", False)
+    sleep_seconds = args.customParameters.get("sleep", 10)
+    write_preliminary_results = args.customParameters.get("write_prelim_results", False)
+
+    results = np.zeros(args.ts.shape[0])
+
+    if write_preliminary_results:
+        results.tofile(args.dataOutput, sep="\n")
+
+    if will_raise:
+        raise Exception("from within")
+
+    time.sleep(sleep_seconds)
+
+    results.tofile(args.dataOutput, sep="\n")
+
+
+if __name__ == "__main__":
+    main()

1-intermediate-images/timeeval-test-algorithm/manifest.json

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+{
+    "title": "timeeval-test-algorithm",
+    "description": "Test algorithm image for TimeEval.",
+    "inputDimensionality": "multivariate",
+    "version": "0.3.0",
+    "authors": "Sebastian Schmidl, Phillip Wenig",
+    "language": "Python",
+    "type": "Detector",
+    "mainFile": "algorithm.py",
+    "learningType": "unsupervised",
+    "executionStep": {
+        "parameters": [
+            {
+                "name": "raise",
+                "type": "bool",
+                "defaultValue": false,
+                "optional": "true",
+                "description": "Force the algorithm to raise an exception and return a non-zero exit-code."
+            },
+            {
+                "name": "sleep",
+                "type": "int",
+                "defaultValue": 10,
+                "optional": "true",
+                "description": "Controls the duration of the algorithm 'processing' via sleeping for a certain amount of time before writing the results."
+            },
+            {
+                "name": "write_prelim_results",
+                "type": "bool",
+                "defaultValue": false,
+                "optional": "true",
+                "description": "If the algorithm should write some results before raising an exception or sleeping."
+            }
+        ],
+        "modelInput": "none"
+    }
+}

1-intermediate-images/tsmp/Dockerfile

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+FROM ghcr.io/timeeval/r-base:0.3.0
+
+LABEL maintainer="[email protected]"
+
+# install tsmp library and cleanup afterwards
+RUN set -eux; \
+    R -e 'install.packages("tsmp")'; \
+    find /usr/lib/R/library -depth \
+      \( \
+        -type d -a \( -name doc -o -name html \) \
+      \) -exec rm -rf '{}' +; \
+    rm -rf /tmp/* /var/tmp/*

1-intermediate-images/tsmp/LICENSE

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+MIT License
+
+Copyright (c) 2020-2023 Phillip Wenig and Sebastian Schmidl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

1-intermediate-images/tsmp/version.txt

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+0.3.0