The aim of this mini-project was to produce a R-markdown document, specifically, a html file, containing a work-through of a transcriptomic analysis pipeline applied to the "Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis) [2D]" dataset (GEO accession number: GSE141535).
An analytical pipeline was created by piecing together requisite R packages, as appropriate for the chosen dataset. The workflow included post-processing and preliminary exploration of the dataset, analysis for differentially expressed genes, and analysis for enriched Gene Ontology and or pathway terms.
Visit the GitHub Pages website on the right side to see the full analysis.