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Omkar Mohite edited this page Apr 20, 2018
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Genome scale metabolic model
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Check if Synthetic Lethals provided or else run fastSL order 2
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Generate xlsx file with list of Synthetic Lethals in output folder
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Run minRerouting with the parameters
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Generate xlsx for minRerouting data
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Generate histogram of sizes of minReSets and scatter plot of two path lengths
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Run clustering of synthetic lethals and generate auto- clustering which can further be curated manually
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Generate files to be used as input for Cytoscape visualization of minReSets of clusters
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Run comparison module on two given Synthetic Lethal sets
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Generate the xlsx file of comparison and histograms
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Pan species redundancies