(Dependencies) Upgrade SQLAlchemy to 1.4 and other requirements (flask 3.0), remove Debian 10 and Python 3.7 support #3412
Workflow file for this run
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| name: pytest | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - hotfixes | |
| - develop | |
| pull_request: | |
| branches: | |
| - master | |
| - hotfixes | |
| - develop | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| debian-version: ["11", "12"] | |
| include: | |
| - debian-version: "11" | |
| python-version: "3.9" | |
| postgres-version: "13" | |
| postgis-version: "3.2" | |
| - debian-version: "12" | |
| python-version: "3.11" | |
| postgres-version: "15" | |
| postgis-version: "3.3" | |
| name: Debian ${{ matrix.debian-version }} | |
| services: | |
| postgres: | |
| image: postgis/postgis:${{ matrix.postgres-version }}-${{ matrix.postgis-version }} | |
| env: | |
| POSTGRES_DB: geonature2db | |
| POSTGRES_PASSWORD: geonatpasswd | |
| POSTGRES_USER: geonatadmin | |
| ports: | |
| - 5432:5432 | |
| options: >- | |
| --health-cmd pg_isready | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 5 | |
| steps: | |
| - name: Add postgis_raster database extension | |
| if: ${{ matrix.postgis-version >= 3 }} | |
| run: | | |
| psql -h localhost -U geonatadmin -d geonature2db -tc 'CREATE EXTENSION "postgis_raster";' | |
| env: | |
| PGPASSWORD: geonatpasswd | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: Add database extensions | |
| run: | | |
| psql -h localhost -U geonatadmin -d geonature2db -f install/assets/db/add_pg_extensions.sql | |
| env: | |
| PGPASSWORD: geonatpasswd | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| - name: Install GDAL | |
| run: | | |
| sudo apt update | |
| sudo apt install -y libgdal-dev | |
| - name: Install dependencies | |
| if: github.base_ref == 'master' | |
| run: | | |
| echo 'Installation des requirements de prod' | |
| python -m pip install --upgrade pip | |
| python -m pip install \ | |
| -e ..[tests] \ | |
| -r requirements.txt | |
| working-directory: ./backend | |
| - name: Install dependencies | |
| if: github.base_ref != 'master' | |
| run: | | |
| echo 'Installation des requirements de dev' | |
| python -m pip install --upgrade pip | |
| python -m pip install \ | |
| -e ..[tests] \ | |
| -r requirements-dev.txt | |
| working-directory: ./backend | |
| - name: Show database branches and dependencies | |
| run: | | |
| geonature db status --dependencies | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| - name: Install database | |
| run: | | |
| install/03b_populate_db.sh | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| srid_local: 2154 | |
| install_bdc_statuts: true | |
| add_sample_data: true | |
| install_sig_layers: true | |
| install_grid_layer_5: true | |
| install_ref_sensitivity: true | |
| - name: Show database status | |
| run: | | |
| geonature db status | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| - name: Install core modules backend | |
| run: | | |
| pip install -e contrib/occtax | |
| pip install -e contrib/gn_module_occhab | |
| pip install -e contrib/gn_module_validation | |
| - name: Install core modules database | |
| run: | | |
| geonature upgrade-modules-db | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| - name: Show database status | |
| run: | | |
| geonature db status --dependencies | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| - name: Test with pytest | |
| run: | | |
| pytest -v --cov --cov-report xml | |
| env: | |
| GEONATURE_CONFIG_FILE: config/test_config.toml | |
| - name: Upload coverage to Codecov | |
| if: ${{ matrix.debian-version == '11' }} | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| flags: pytest |