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Issues: PavlidisLab/rnaseq-pipeline
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Handle SRA experiments with multiple lanes mapped on distinct runs
#94
opened Jul 3, 2024 by
arteymix
4 tasks
CI fails because /rest/v2/datasets/GSE110256/hasbatch requires admin role
#96
opened Oct 28, 2024 by
arteymix
Batch information that has been deemed unuseable are not considered completed
#64
opened Sep 11, 2021 by
arteymix
Use luigi.TaskParameter for platforms and sources-specific tasks
enhancement
#62
opened Aug 16, 2021 by
arteymix
Build and install the shared memory cleanup tool during initial setup
#58
opened Jun 25, 2021 by
arteymix
Add automated quality control checks before submitting data to Gemma
enhancement
#51
opened Jan 15, 2021 by
arteymix
5 tasks
Support extracting batch information from FASTQ headers with underscores
enhancement
#43
opened Mar 14, 2020 by
arteymix
Upload pipeline metadata to Gemma
enhancement
gemma
Features/Bug related to Gemma integration
#41
opened Mar 2, 2020 by
arteymix
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