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Add required attribute to extensions in yaml file #545

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merged 1 commit into from
Jul 20, 2022

Commits on May 24, 2022

  1. Add required attribute to extensions in yaml file

    PEtab extensions were introduced in #537. We should be able to distinguish there between optional extensions and required extensions, i.e. those that modify the parameter estimation problem as such, and those that just add additional/optional information (e.g. annotations, info for visualization, ...). If some tool does not know about a certain optional extension, it can safely be ignored during import, if it does not know about a required extension, it should fail.
    
    This PR adds a `required` attribute to extensions in the yaml file to indicate whether they are required for the mathematical interpretation of the PEtab problem.
    dweindl committed May 24, 2022
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