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@PDCMFinder

PDCMFinder

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  1. pdxfinder pdxfinder Public

    PDX Finder performs integration, standardization, analysis and visualization of the complex and diverse data associated with PDX mouse models for the cancer community.

    Java 6 6

  2. PdcmDataTransformers PdcmDataTransformers Public

    Jupyter notebooks and python code for more of the bespoke data tranformations

    Jupyter Notebook 3

  3. cancer-models cancer-models Public

    PDCM Finder - cancermodels.org web portal code base

    TypeScript 3

  4. pdcm-lectern-validator pdcm-lectern-validator Public

    Template validator service for PDCM Finder using Lectern

    TypeScript 2

  5. mutation-annotater mutation-annotater Public

    annotation pipeline for PDXFinder mut and cna templates using VEP

    Python 1

  6. pdx-liftover pdx-liftover Public

    Java 1

Repositories

Showing 10 of 33 repositories
  • entity2Ontology Public

    Tool for mapping source entities to ontology terms

    PDCMFinder/entity2Ontology’s past year of commit activity
    Java 0 Apache-2.0 0 0 0 Updated Apr 11, 2025
  • cancer-models Public

    PDCM Finder - cancermodels.org web portal code base

    PDCMFinder/cancer-models’s past year of commit activity
    TypeScript 3 Apache-2.0 0 8 1 Updated Apr 9, 2025
  • pdcm-etl Public

    ETL process for the PDCM project

    PDCMFinder/pdcm-etl’s past year of commit activity
    Python 1 Apache-2.0 1 13 0 Updated Apr 1, 2025
  • pdcm-admin-api Public

    API for PDCM Admin

    PDCMFinder/pdcm-admin-api’s past year of commit activity
    Java 1 1 5 0 Updated Mar 26, 2025
  • PdcmDataTransformers Public

    Jupyter notebooks and python code for more of the bespoke data tranformations

    PDCMFinder/PdcmDataTransformers’s past year of commit activity
    Jupyter Notebook 3 0 1 0 Updated Mar 11, 2025
  • data-dashboard Public
    PDCMFinder/data-dashboard’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 4, 2025
  • pdcm-submission Public

    Data submission portal for CancerModels.org. It helps users in getting familiar with the data model and validating their submission.

    PDCMFinder/pdcm-submission’s past year of commit activity
    TypeScript 0 AGPL-3.0 0 0 0 Updated Jan 15, 2025
  • MI-Standard-In-vitro-models Public

    a Minimal Information standard to describe the invitro models

    PDCMFinder/MI-Standard-In-vitro-models’s past year of commit activity
    0 0 0 0 Updated Jan 15, 2025
  • PDCM-corpus Public

    Repository for PDCM Corpus

    PDCMFinder/PDCM-corpus’s past year of commit activity
    0 CC0-1.0 0 0 0 Updated Dec 23, 2024
  • pdcm-admin-ui Public

    PDCM Admin provides an easy way to manage key processes that are an input for the PDCM Finder project, like the mappings of treatments and diagnoses.

    PDCMFinder/pdcm-admin-ui’s past year of commit activity
    JavaScript 1 Apache-2.0 1 2 0 Updated Dec 5, 2024
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