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Update doc to use new PeptideIdentificationList

documentation

Status: Open.

#474 In OpenMS/pyopenms-docs;

· timosachsenberg opened on Jul 16, 2025

'pyopenms._pyopenms_6.MSChromatogram' object has no attribute 'get_df'

bug

Status: Open.

#458 In OpenMS/pyopenms-docs;

· vdaevoloop opened on Mar 11, 2025

API docs do not follow the version in conf.py

critical

Status: Open.

#453 In OpenMS/pyopenms-docs;

· jpfeuffer opened on Feb 25, 2025

Nightly pip install instructions install 3.2.0 rather than the latest version.

bug

Status: Open.

#452 In OpenMS/pyopenms-docs;

· jonathan-hunter opened on Jan 23, 2025

recent documentation versions (other than latest) inaccessible on readthedocs.io

documentation

Status: Open.

#451 In OpenMS/pyopenms-docs;

· jonathan-hunter opened on Jan 22, 2025

add code snipped on how to filter by native id

documentation

Status: Open.

#441 In OpenMS/pyopenms-docs;

· timosachsenberg opened on Jul 9, 2024

Extract specific information from feature_map and matched to ConsensusMap

documentation

Status: Open.

#438 In OpenMS/pyopenms-docs;

· chulexuexibiedebushihewo opened on Jun 26, 2024

Get wrong MassTraceDetection results

bug

Status: Open.

#437 In OpenMS/pyopenms-docs;

· xieyying opened on Jun 16, 2024

add Tutorial on saving a subset of data (zoomed in 2D area)

documentation

Status: Open.

#436 In OpenMS/pyopenms-docs;

· timosachsenberg opened on Jun 6, 2024

correction charge in mzML file

documentation

Status: Open.

#435 In OpenMS/pyopenms-docs;

· neel-lab opened on May 28, 2024

An AttributeError: 'pyopenms.pyopenms_1.ConsensusMap' object has no attribute 'get_df'

Status: Open.

#422 In OpenMS/pyopenms-docs;

· chulexuexibiedebushihewo opened on Nov 19, 2023

Add some tutorial on basic OpenSWATH chromatogram algorithms

documentation

sprint candidate

Status: Open.

#416 In OpenMS/pyopenms-docs;

· timosachsenberg opened on Nov 3, 2023