Add GitHub actions

.cspell/custom-dictionary.txt

@@ -0,0 +1,16 @@
+ARPES
+cmap
+codemirror
+ipython
+kernelspec
+matplotlib
+mpes
+nbconvert
+nbformat
+numpy
+nxarray
+pygments
+pyplot
+pytestqt
+qtbot
+venv

.github/workflows/linting.yml

@@ -0,0 +1,45 @@
+name: linting
+
+# Triggers the workflow on push for all branches
+on:
+  push:
+
+jobs:
+  lint:
+    runs-on: ubuntu-latest
+    steps:
+      # Check out repo and set up Python
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      # Setup python
+
+      - name: Install uv and set the python version to 3.12
+        uses: astral-sh/setup-uv@v5
+        with:
+          python-version: 3.12
+
+      - name: Install package and dev dependencies
+        run: |
+          uv pip install ".[dev]"
+
+      # Linting steps, execute all linters even if one fails
+      - name: ruff check
+        run:
+          ruff check src/mpes_tools tests
+      - name: ruff formatting
+        if: ${{ always() }}
+        run:
+          ruff format --check src/mpes_tools tests
+      - name: mypy
+        if: ${{ always() }}
+        run:
+          mypy src/mpes_tools tests
+      - name: spellcheck
+        if: ${{ always() }}
+        uses: streetsidesoftware/cspell-action@v6
+        with:
+          check_dot_files: false
+          incremental_files_only: false
+          config: './cspell.json'

.github/workflows/release.yml

@@ -0,0 +1,41 @@
+name: Upload Python Package
+
+# Workflow runs a release job on every published tag.
+# The package is distributed as sed-processor
+on:
+  release:
+    types: [published]
+
+env:
+  python-version: 3.12
+
+jobs:
+  release:
+    name: Upload release to PyPI
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/p/mpes-tools
+      # name: testpypi
+      # url: https://test.pypi.org/p/mpes-tools
+    permissions:
+      id-token: write
+
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Install uv and set the python version to ${{ env.python-version }}
+        uses: astral-sh/setup-uv@v5
+        with:
+          python-version: ${{ env.python-version }}
+
+      - name: Build package
+        run: uv build
+
+      - name: Publish package distributions to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          verbose: true
+          # repository-url: https://test.pypi.org/legacy/

.github/workflows/testing_coverage.yml

@@ -0,0 +1,40 @@
+name: pytest and coverage report
+
+# Triggers the workflow on push for all branches and PR only for main
+on:
+  push:
+    branches: [ main ]
+  pull_request:
+    branches: [ main ]
+
+jobs:
+  pytest:
+    runs-on: ubuntu-latest
+    steps:
+      # Check out repo and set up Python
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      # Setup python
+      - name: Install uv and set the python version to 3.12
+        uses: astral-sh/setup-uv@v5
+        with:
+          python-version: 3.12
+
+      - name: Install package
+        run: |
+          uv pip install -e ".[dev]"
+
+      # Run pytest with coverage report, saving to xml
+      - name: Run tests on python 3.12
+        run: |
+          export QT_QPA_PLATFORM=offscreen
+          pytest --cov --cov-report xml:cobertura.xml --full-trace --show-capture=no -sv -n auto tests/
+
+      # Take report and upload to coveralls
+      - name: Coveralls
+        uses: coverallsapp/github-action@v2
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}
+          file: ./cobertura.xml

.github/workflows/testing_multiversion.yml

@@ -0,0 +1,38 @@
+# Tests for all supported versions [Python 3.9|3.10|3.11|3.12]
+name: Unit Tests
+
+on:
+  schedule:
+    - cron:  '0 1 * * 1'
+  workflow_dispatch:
+  push:
+    branches: [ main ]
+
+jobs:
+  pytest:
+    runs-on: ubuntu-latest
+    # Using matrix strategy
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
+
+    steps:
+      # Check out repo and set up Python
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Install uv and set the python version to ${{ matrix.python-version }}
+        uses: astral-sh/setup-uv@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - name: Install package and test dependencies
+        run: |
+          uv pip install ".[dev]"
+
+      - name: Run tests on python ${{matrix.python-version}}
+        run: |
+          export QT_QPA_PLATFORM=offscreen
+          pytest --full-trace --show-capture=no -sv -n auto tests/

.gitignore

@@ -161,4 +161,5 @@ cython_debug/
 #  option (not recommended) you can uncomment the following to ignore the entire idea folder.
 #.idea/
 
-poetry.toml
+poetry.toml
+*.nxs

pyproject.toml

@@ -19,22 +19,26 @@ authors = [
 readme = "README.md"
 keywords = ["mpes", "arpes", "trarpes", "gui"]
 license = { file = "LICENSE" }
-requires-python = ">=3.9,<3.13"
+requires-python = ">=3.9"
 classifiers = [
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
     "License :: OSI Approved :: MIT License",
     "Operating System :: OS Independent",
 ]
 
 dependencies = [
+    "ipython>=8.0.0",
     "lmfit>=1.0.3",
     "matplotlib>=3.8.0",
     "numpy>=1.26.1,<2.0",
     "PyQt5>=5.0.0",
     "xarray>=0.20.2",
+    "nxarray>=0.4.4",
+    "superqt >=0.3.0",
 ]
 
 [project.urls]
@@ -47,6 +51,7 @@ dev = [
     "pytest-cov>=3.0.0",
     "pytest-xdist>=2.5.0",
     "pytest-clarity>=1.0.1",
+    "pytest-qt",
     "ruff<0.3.0,>=0.1.7",
     "mypy<1.10.0,>=1.6.0",
     "pre-commit>=3.0.0",