🔄 synced file(s) with ODINN-SciML/Sleipnir.jl

.github/workflows/CI.yml

@@ -4,8 +4,7 @@ on:
     branches:
       - main
    push:
-    branches:
-      - main
+    branches: []
     tags: '*'
 concurrency:
   # Skip intermediate builds: always.
@@ -38,7 +37,7 @@ jobs:
       - name: Create environment with micromamba 🐍🖤
         uses: mamba-org/setup-micromamba@v1
         with: 
-          micromamba-version: '1.3.1-0'
+          micromamba-version: '1.5.6-0'
           environment-file: ./environment.yml
           environment-name: oggm_env                # it is recommendable to add both name and yml file. 
           init-shell: bash
@@ -63,39 +62,24 @@ jobs:
         with:
           version: ${{ matrix.version }}
           arch: ${{ matrix.arch }}
+      - name: Check Julia SSL certifications 🔎🔐
+        run: julia -e 'using NetworkOptions; println(NetworkOptions.bundled_ca_roots()); println(NetworkOptions.ca_roots())'
+        shell: bash -el {0}
       - uses: julia-actions/cache@v1
         with:
           cache-registries: "true"
           cache-compiled: "true"
       - uses: julia-actions/julia-buildpkg@v1
         env:
           PYTHON : /home/runner/micromamba/envs/oggm_env/bin/python
+          # The SSL certificate path can be readed from the action "Check Julia SSL certifications"
+          SSL_CERT_FILE: /etc/ssl/certs/ca-certificates.crt
       - uses: julia-actions/julia-runtest@v1
+        env:
+          PYTHON : /home/runner/micromamba/envs/oggm_env/bin/python
+          SSL_CERT_FILE: /etc/ssl/certs/ca-certificates.crt
       - uses: julia-actions/julia-processcoverage@v1
       - uses: codecov/codecov-action@v3
         with:
           token: ${{secrets.CODECOV_TOKEN}}
           files: lcov.info
-  # docs:
-  #   name: Documentation
-  #   runs-on: ubuntu-latest
-  #   permissions:
-  #     contents: write
-  #     statuses: write
-  #   steps:
-  #     - uses: actions/checkout@v2
-  #     - uses: julia-actions/setup-julia@v1
-  #       with:
-  #         version: '1.9'
-  #     - uses: julia-actions/julia-buildpkg@v1
-  #       env:
-  #           PYTHON : /home/runner/micromamba/envs/oggm_env/bin/python
-  #     - uses: julia-actions/julia-docdeploy@v1
-  #       env:
-  #         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  #     - run: |
-  #         julia --project=docs -e '
-  #           using Documenter: DocMeta, doctest
-  #           using ODINN
-  #           DocMeta.setdocmeta!(ODINN, :DocTestSetup, :(using ODINN); recursive=true)
-  #           doctest(ODINN)'

environment.yml

@@ -5,43 +5,43 @@ channels:
 
 dependencies:
   # Base language runtimes
-  - python=3.9
+  - python=3.12
 
   # Python packages
-  - bottleneck
-  - cartopy
-  - configobj
-  - dask
-  - gdal=3.3
-  - geopandas
-  - ipython
-  - jupyter
-  - jupyterlab
-  - matplotlib
-  - motionless
-  - netcdf4
-  - numpy
-  - numpydoc
-  - pandas
-  - Pillow
-  - pip
-  - pyproj
-  - pytables
-  - pytest
-  - rasterio  
-  - rioxarray
-  - salem
-  - seaborn
-  - shapely
-  - scikit-image
-  - scikit-learn
-  - scipy
-  - xarray
+  - bottleneck=1.3
+  - cartopy=0.22
+  - configobj=5.0
+  - dask=2024.3
+  - gdal=3.8
+  - geopandas=0.14
+  - ipython=8.22
+  - jupyter=1.0
+  - jupyterlab=4.1
+  - matplotlib=3.8
+  - motionless=1.3
+  - netcdf4=1.6
+  - numpy=1.26
+  - numpydoc=1.6
+  - pandas=2.2
+  - Pillow=10.2
+  - pip=24.0
+  - pyproj=3.6
+  - pytables=3.9
+  - pytest=8.1
+  - rasterio=1.3
+  - rioxarray=0.15
+  - salem=0.3
+  - seaborn=0.13
+  - shapely=2.0
+  - scikit-image=0.22
+  - scikit-learn=1.4
+  - scipy=1.12
+  - xarray=2024.2
 
   # Packages installed through pip
   - pip:
-    - joblib
-    - progressbar2
+    - joblib==1.3
+    - progressbar2==4.4
     - git+https://github.com/OGGM/pytest-mpl
     - git+https://github.com/OGGM/massbalance-sandbox
     - oggm==1.6.0