Built site for gh-pages

National-Clinical-Cohort-Collaborative · Feb 29, 2024 · 591d13a · 591d13a
1 parent 104d19f
commit 591d13a
Show file tree

Hide file tree

Showing 16 changed files with 35 additions and 33 deletions.
diff --git a/.nojekyll b/.nojekyll
@@ -1 +1 @@
-459cbd57
+8c8a3464
diff --git a/The-Researcher-s-Guide-to-N3C.epub b/The-Researcher-s-Guide-to-N3C.epub
diff --git a/chapters/access.html b/chapters/access.html
@@ -1397,7 +1397,7 @@ <h3 data-number="6.8.1" class="anchored" data-anchor-id="sec-access-my-leads"><s
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":false,"closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","loop":false,"descPosition":"bottom","closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/cycle.html b/chapters/cycle.html
@@ -1416,7 +1416,7 @@ <h3 data-number="3.5.7" class="anchored" data-anchor-id="sec-cycle-enhancements-
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","loop":false,"closeEffect":"zoom","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","loop":false,"openEffect":"zoom","closeEffect":"zoom","selector":".lightbox"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/governance.html b/chapters/governance.html
@@ -444,7 +444,7 @@ <h2 data-number="4.4" class="anchored" data-anchor-id="sec-governance-bridges"><
 <div id="fig-governance-010-shared" class="quarto-figure quarto-figure-center quarto-float anchored" alt="N3C shared Governance initiatives with sign-off responsibility represented">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-010-shared-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/governance/fig-governance-010-shared.png" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1"><img src="images/governance/fig-governance-010-shared.png" class="img-fluid figure-img" alt="N3C shared Governance initiatives with sign-off responsibility represented"></a>
+<a href="images/governance/fig-governance-010-shared.png" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1"><img src="images/governance/fig-governance-010-shared.png" class="img-fluid figure-img" alt="N3C shared Governance initiatives with sign-off responsibility represented"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-010-shared-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.1: N3C shared Governance initiatives with sign-off responsibility represented.
@@ -471,7 +471,7 @@ <h2 data-number="4.7" class="anchored" data-anchor-id="sec-governance-access"><s
 <div id="fig-governance-020-tiers" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Data Tiers">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-020-tiers-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/governance/fig-governance-020-tiers.png" class="lightbox" data-gallery="quarto-lightbox-gallery-2" data-glightbox="description: .lightbox-desc-2"><img src="images/governance/fig-governance-020-tiers.png" class="img-fluid figure-img" alt="Data Tiers"></a>
+<a href="images/governance/fig-governance-020-tiers.png" class="lightbox" data-glightbox="description: .lightbox-desc-2" data-gallery="quarto-lightbox-gallery-2"><img src="images/governance/fig-governance-020-tiers.png" class="img-fluid figure-img" alt="Data Tiers"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-020-tiers-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.2: Data Tiers.
@@ -483,7 +483,7 @@ <h2 data-number="4.7" class="anchored" data-anchor-id="sec-governance-access"><s
 <div id="fig-governance-030-process" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Data Access Governance Process.">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-030-process-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images//governance/fig-governance-030-process.png" class="lightbox" data-gallery="quarto-lightbox-gallery-3" data-glightbox="description: .lightbox-desc-3"><img src="images//governance/fig-governance-030-process.png" class="img-fluid figure-img" alt="Data Access Governance Process."></a>
+<a href="images//governance/fig-governance-030-process.png" class="lightbox" data-glightbox="description: .lightbox-desc-3" data-gallery="quarto-lightbox-gallery-3"><img src="images//governance/fig-governance-030-process.png" class="img-fluid figure-img" alt="Data Access Governance Process."></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-030-process-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.3: Data Access Governance Process. To lower the burden on participation, user authentication and eligibility are established once during account registration. Eligible users can then submit their Data Use Request for evaluation by the Data Access Committee. A new request must be submitted for each specific project.
@@ -1093,7 +1093,7 @@ <h2 data-number="4.8" class="anchored" data-anchor-id="sec-governance-incident">
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom","selector":".lightbox","loop":false});
+<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","selector":".lightbox","loop":false,"openEffect":"zoom","descPosition":"bottom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/intro.html b/chapters/intro.html
@@ -434,7 +434,7 @@ <h2 data-number="1.2" class="anchored" data-anchor-id="sec-intro-cdm"><span clas
 <div id="fig-intro-010-siloed" class="quarto-figure quarto-figure-center quarto-float anchored" alt="A visual representation of disparate, non-compatible EHR databases across the United States">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-intro-010-siloed-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/intro/fig-intro-010-siloed.png" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1"><img src="images/intro/fig-intro-010-siloed.png" class="img-fluid figure-img" alt="A visual representation of disparate, non-compatible EHR databases across the United States"></a>
+<a href="images/intro/fig-intro-010-siloed.png" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1"><img src="images/intro/fig-intro-010-siloed.png" class="img-fluid figure-img" alt="A visual representation of disparate, non-compatible EHR databases across the United States"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-intro-010-siloed-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;1.1: A visual representation of disparate, non-compatible EHR databases across the United States.
@@ -450,7 +450,7 @@ <h2 data-number="1.3" class="anchored" data-anchor-id="sec-intro-enclave"><span
 <div id="fig-intro-intro-harmonized" class="quarto-figure quarto-figure-center quarto-float anchored" alt="A visual representation of N3C's data harmonization from source-CDM model, and team-based access to these data in a secure cloud-based Enclave">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-intro-intro-harmonized-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/intro/fig-intro-020-harmonized.png" class="lightbox" data-glightbox="description: .lightbox-desc-2" data-gallery="quarto-lightbox-gallery-2"><img src="images/intro/fig-intro-020-harmonized.png" class="img-fluid figure-img" alt="A visual representation of N3C's data harmonization from source-CDM model, and team-based access to these data in a secure cloud-based Enclave"></a>
+<a href="images/intro/fig-intro-020-harmonized.png" class="lightbox" data-gallery="quarto-lightbox-gallery-2" data-glightbox="description: .lightbox-desc-2"><img src="images/intro/fig-intro-020-harmonized.png" class="img-fluid figure-img" alt="A visual representation of N3C's data harmonization from source-CDM model, and team-based access to these data in a secure cloud-based Enclave"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-intro-intro-harmonized-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;1.2: A visual representation of N3C’s data harmonization from source-CDM model, and team-based access to these data in a secure cloud-based Enclave.
@@ -462,7 +462,7 @@ <h2 data-number="1.3" class="anchored" data-anchor-id="sec-intro-enclave"><span
 <div id="fig-intro-030-summary-stats" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Summary statistics for N3C patients as of Aug, 2022. Confirmed COVID-19 patients are those with a known positive PCR or Antigen lab test, possible patients are those with likely symptomatology">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-intro-030-summary-stats-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/intro/fig-intro-030-summary-stats.png" class="lightbox" data-glightbox="description: .lightbox-desc-3" data-gallery="quarto-lightbox-gallery-3"><img src="images/intro/fig-intro-030-summary-stats.png" class="img-fluid figure-img" alt="Summary statistics for N3C patients as of Aug, 2022. Confirmed COVID-19 patients are those with a known positive PCR or Antigen lab test, possible patients are those with likely symptomatology"></a>
+<a href="images/intro/fig-intro-030-summary-stats.png" class="lightbox" data-gallery="quarto-lightbox-gallery-3" data-glightbox="description: .lightbox-desc-3"><img src="images/intro/fig-intro-030-summary-stats.png" class="img-fluid figure-img" alt="Summary statistics for N3C patients as of Aug, 2022. Confirmed COVID-19 patients are those with a known positive PCR or Antigen lab test, possible patients are those with likely symptomatology"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-intro-030-summary-stats-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;1.3: Summary statistics for N3C patients as of Aug, 2022. Confirmed COVID-19 patients are those with a known positive PCR or Antigen lab test, possible patients are those with likely symptomatology.
@@ -1120,7 +1120,7 @@ <h3 data-number="1.4.2" class="anchored" data-anchor-id="sec-intro-next-institut
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","closeEffect":"zoom","selector":".lightbox","loop":false,"descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","loop":false,"descPosition":"bottom","closeEffect":"zoom","selector":".lightbox"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;