Built site for gh-pages

National-Clinical-Cohort-Collaborative · Mar 19, 2024 · 09bd3d2 · 09bd3d2
1 parent 8e23047
commit 09bd3d2
Show file tree

Hide file tree

Showing 18 changed files with 61 additions and 60 deletions.
diff --git a/.nojekyll b/.nojekyll
@@ -1 +1 @@
-a29c94e3
+38a16762
diff --git a/The-Researcher-s-Guide-to-N3C.epub b/The-Researcher-s-Guide-to-N3C.epub
diff --git a/chapters/access.html b/chapters/access.html
diff --git a/chapters/cycle.html b/chapters/cycle.html
@@ -1507,7 +1507,7 @@ <h3 data-number="3.5.7" class="anchored" data-anchor-id="sec-cycle-enhancements-
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","loop":false,"closeEffect":"zoom","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","descPosition":"bottom","loop":false,"closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/governance.html b/chapters/governance.html
@@ -499,7 +499,7 @@ <h2 data-number="4.4" class="anchored" data-anchor-id="sec-governance-bridges"><
 <div id="fig-governance-010-shared" class="quarto-figure quarto-figure-center quarto-float anchored" alt="N3C shared Governance initiatives with sign-off responsibility represented">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-010-shared-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/governance/fig-governance-010-shared.png" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1"><img src="images/governance/fig-governance-010-shared.png" class="img-fluid figure-img" alt="N3C shared Governance initiatives with sign-off responsibility represented"></a>
+<a href="images/governance/fig-governance-010-shared.png" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1"><img src="images/governance/fig-governance-010-shared.png" class="img-fluid figure-img" alt="N3C shared Governance initiatives with sign-off responsibility represented"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-010-shared-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.1: N3C shared Governance initiatives with sign-off responsibility represented.
@@ -526,7 +526,7 @@ <h2 data-number="4.7" class="anchored" data-anchor-id="sec-governance-access"><s
 <div id="fig-governance-020-tiers" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Data Tiers">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-020-tiers-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/governance/fig-governance-020-tiers.png" class="lightbox" data-glightbox="description: .lightbox-desc-2" data-gallery="quarto-lightbox-gallery-2"><img src="images/governance/fig-governance-020-tiers.png" class="img-fluid figure-img" alt="Data Tiers"></a>
+<a href="images/governance/fig-governance-020-tiers.png" class="lightbox" data-gallery="quarto-lightbox-gallery-2" data-glightbox="description: .lightbox-desc-2"><img src="images/governance/fig-governance-020-tiers.png" class="img-fluid figure-img" alt="Data Tiers"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-020-tiers-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.2: Data Tiers.
@@ -538,7 +538,7 @@ <h2 data-number="4.7" class="anchored" data-anchor-id="sec-governance-access"><s
 <div id="fig-governance-030-process" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Data Access Governance Process.">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-governance-030-process-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images//governance/fig-governance-030-process.png" class="lightbox" data-glightbox="description: .lightbox-desc-3" data-gallery="quarto-lightbox-gallery-3"><img src="images//governance/fig-governance-030-process.png" class="img-fluid figure-img" alt="Data Access Governance Process."></a>
+<a href="images//governance/fig-governance-030-process.png" class="lightbox" data-gallery="quarto-lightbox-gallery-3" data-glightbox="description: .lightbox-desc-3"><img src="images//governance/fig-governance-030-process.png" class="img-fluid figure-img" alt="Data Access Governance Process."></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-governance-030-process-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4.3: Data Access Governance Process. To lower the burden on participation, user authentication and eligibility are established once during account registration. Eligible users can then submit their Data Use Request for evaluation by the Data Access Committee. A new request must be submitted for each specific project.
@@ -1157,7 +1157,7 @@ <h2 data-number="4.8" class="anchored" data-anchor-id="sec-governance-incident">
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","descPosition":"bottom","closeEffect":"zoom","loop":false});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","loop":false,"descPosition":"bottom","closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/intro.html b/chapters/intro.html
@@ -1184,7 +1184,7 @@ <h3 data-number="1.4.2" class="anchored" data-anchor-id="sec-intro-next-institut
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","descPosition":"bottom","closeEffect":"zoom","loop":false});
+<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","selector":".lightbox","loop":false,"descPosition":"bottom","openEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/ml.html b/chapters/ml.html
@@ -1562,7 +1562,7 @@ <h3 data-number="12.4.3" class="anchored" data-anchor-id="using-r-in-code-workbo
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","selector":".lightbox","loop":false,"closeEffect":"zoom","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","selector":".lightbox","openEffect":"zoom","loop":false,"closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/onboarding.html b/chapters/onboarding.html
@@ -1469,7 +1469,7 @@ <h3 data-number="5.8.2" class="anchored" data-anchor-id="sec-onboarding-tools-sl
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","openEffect":"zoom","selector":".lightbox","closeEffect":"zoom","loop":false});
+<script>var lightboxQuarto = GLightbox({"loop":false,"openEffect":"zoom","descPosition":"bottom","selector":".lightbox","closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/practices.html b/chapters/practices.html
@@ -2283,7 +2283,7 @@ <h3 data-number="9.5.3" class="anchored" data-anchor-id="sec-practices-completio
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":false,"descPosition":"bottom","openEffect":"zoom","closeEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":false,"closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/publishing.html b/chapters/publishing.html
@@ -1475,7 +1475,7 @@ <h2 data-number="10.4" class="anchored" data-anchor-id="sec-publishing-ks"><span
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"loop":false,"selector":".lightbox","openEffect":"zoom","descPosition":"bottom","closeEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","closeEffect":"zoom","loop":false,"descPosition":"bottom","selector":".lightbox"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/story.html b/chapters/story.html
@@ -547,7 +547,7 @@ <h2 id="toc-title">Table of contents</h2>
 <div id="fig-story-010-intro-to-story" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Path of a typical N3C project">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-story-010-intro-to-story-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/story/fig-story-010-intro-to-story.png" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1"><img src="images/story/fig-story-010-intro-to-story.png" class="img-fluid figure-img" alt="Path of a typical N3C project"></a>
+<a href="images/story/fig-story-010-intro-to-story.png" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1"><img src="images/story/fig-story-010-intro-to-story.png" class="img-fluid figure-img" alt="Path of a typical N3C project"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-story-010-intro-to-story-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;2.1: Path of a typical N3C project.
@@ -613,7 +613,7 @@ <h2 data-number="2.1" class="anchored" data-anchor-id="sec-story-onboarding"><sp
 <div id="fig-story-020-dur" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Submitted Data Use Request">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-story-020-dur-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/story/fig-story-020-dur.png" class="lightbox" data-gallery="quarto-lightbox-gallery-2" data-glightbox="description: .lightbox-desc-2"><img src="images/story/fig-story-020-dur.png" class="img-fluid figure-img" alt="Submitted Data Use Request"></a>
+<a href="images/story/fig-story-020-dur.png" class="lightbox" data-glightbox="description: .lightbox-desc-2" data-gallery="quarto-lightbox-gallery-2"><img src="images/story/fig-story-020-dur.png" class="img-fluid figure-img" alt="Submitted Data Use Request"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-story-020-dur-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;2.2: Submitted Data Use Request.
@@ -648,7 +648,7 @@ <h2 data-number="2.2" class="anchored" data-anchor-id="sec-story-team"><span cla
 <div id="fig-story-030-team-formation" class="quarto-figure quarto-figure-center quarto-float anchored" alt="Typical N3C Team Composition">
 <figure class="quarto-float quarto-float-fig figure">
 <div aria-describedby="fig-story-030-team-formation-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="images/story/fig-story-030-team-formation.png" class="lightbox" data-gallery="quarto-lightbox-gallery-3" data-glightbox="description: .lightbox-desc-3"><img src="images/story/fig-story-030-team-formation.png" class="img-fluid figure-img" alt="Typical N3C Team Composition"></a>
+<a href="images/story/fig-story-030-team-formation.png" class="lightbox" data-glightbox="description: .lightbox-desc-3" data-gallery="quarto-lightbox-gallery-3"><img src="images/story/fig-story-030-team-formation.png" class="img-fluid figure-img" alt="Typical N3C Team Composition"></a>
 </div>
 <figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-story-030-team-formation-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;2.3: Typical N3C Team Composition.
@@ -1805,7 +1805,7 @@ <h2 data-number="2.8" class="anchored" data-anchor-id="sec-story-manuscript"><sp
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","loop":false,"descPosition":"bottom","closeEffect":"zoom","selector":".lightbox"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","openEffect":"zoom","descPosition":"bottom","loop":false,"closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/support.html b/chapters/support.html
@@ -1522,7 +1522,7 @@ <h3 data-number="11.9.2" class="anchored" data-anchor-id="sec-support-liaisons-l
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","descPosition":"bottom","openEffect":"zoom","loop":false,"closeEffect":"zoom"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":false,"openEffect":"zoom","closeEffect":"zoom","descPosition":"bottom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/tools.html b/chapters/tools.html
@@ -1505,7 +1505,7 @@ <h3 data-number="8.4.7" class="anchored" data-anchor-id="sec-tools-apps-lineage"
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","selector":".lightbox","loop":false,"openEffect":"zoom","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","descPosition":"bottom","closeEffect":"zoom","loop":false,"openEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/chapters/understanding.html b/chapters/understanding.html
@@ -1664,7 +1664,7 @@ <h2 data-number="7.6" class="anchored" data-anchor-id="sec-understanding-public"
 </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","closeEffect":"zoom","loop":false,"selector":".lightbox","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","openEffect":"zoom","selector":".lightbox","loop":false,"closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;