[pull] develop from ehrbase:develop #208
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Commits on May 29, 2024
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Bump org.pf4j:pf4j from 3.11.0 to 3.11.1
Bumps [org.pf4j:pf4j](https://github.com/pf4j/pf4j) from 3.11.0 to 3.11.1. - [Release notes](https://github.com/pf4j/pf4j/releases) - [Changelog](https://github.com/pf4j/pf4j/blob/master/CHANGELOG.md) - [Commits](pf4j/pf4j@release-3.11.0...release-3.11.1) --- updated-dependencies: - dependency-name: org.pf4j:pf4j dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>
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Merge pull request #1319 from ehrbase/dependabot/maven/org.pf4j-pf4j-…
…3.11.1 Bump org.pf4j:pf4j from 3.11.0 to 3.11.1
Commits on Jun 4, 2024
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CDR-1456 Performance improvement for structure subqueries targeting n…
…on locatable rm types
Commits on Jun 5, 2024
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Merge pull request #1341 from ehrbase/feature/CDR-1456
CDR-1456 Performance improvement for structure subqueries targeting n…
Commits on Jun 6, 2024
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CDR-1401 Add Robot tests with Basic and OAUTH2 auth types (#1342)
* feat: CDR-1401 change SECURITY_AUTHTYPE to use an env var to ehrbase container * feat: CDR-1401 add env var with AUTH_TYPE value * fix: CDR-1401 send properly the env vars to docker compose * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline with default value NONE on SECURITY_AUTH_TYPE * fix: CDR-1401 test pipeline - send AUTH type * fix: CDR-1401 set SECURITY_AUTHTYPE: NONE to ehrbase docker compose service * fix: CDR-1401 test with AUTH_TYPE=OAUTH * fix: CDR-1401 test with AUTH_TYPE=BASIC * fix: CDR-1401 add SECURITY_AUTHTYPE: 'NONE' * fix: CDR-1401 set AUTH_TYPE to be accesible in docker-compose-int-test.yml * fix: CDR-1401 set AUTH_TYPE to be accesible in docker-compose-int-test.yml through * fix: CDR-1401 add AUTH_TYPE to env var * fix: CDR-1401 adjust docker-compose-int-test to accept var * fix: CDR-1401 adjust docker-compose-int-test to accept var modified * fix: CDR-1401 test pipeline with BASIC SECURITY_AUTHTYPE for ehrbase docker service * fix: CDR-1401 use export to send AUTH_TYPE value * fix: CDR-1401 set AUTH_TYPE to auth.env file to be used in docker compose * fix: CDR-1401 set AUTH_TYPE to auth.env file to be used in docker compose * fix: CDR-1401 set AUTH_TYPE to auth.env file to be used in docker compose * fix: CDR-1401 remove SECURITY_AUTHTYPE var from docker-compose-int-test.yml file - ehrbase service * fix: CDR-1401 test pipeline with SECURITY_AUTHTYPE=NONE set in .env.ehrbase * fix: CDR-1401 set SECURITY_AUTHTYPE based on value from matrix.test-suite * fix: CDR-1401 test pipeline with different auth types * feat: CDR-1401 enable AUTH_TYPE_TESTS BASIC cases * feat: CDR-1401 set value to SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUERURI if AUTH_TYPE is OAUTH * fix: CDR-1401 adjust how Keycloak is started and import realm, wait for keycloak to be ready * fix: CDR-1401 get logs from Keycloak * fix: CDR-1401 check OAUTH tests * fix: CDR-1401 retry keycloak to have cdr-core-sanity-check realm * fix: CDR-1401 increase sleep for keycloak for debug * fix: CDR-1401 fix retries for keycloak to check for realm existence * fix: CDR-1401 fix if ending on retries for keycloak to check for realm existence * fix: CDR-1401 test pipeline with keycloak/import inside workflows folder * fix: CDR-1401 test retry for keycloak * fix: CDR-1401 test retry for keycloak * fix: CDR-1401 use pwd to provide full path for realm to be imported * fix: CDR-1401 use . to provide relative path for realm to be imported * fix: CDR-1401 display files and folders, check rights * fix: CDR-1401 move folder with keycloak import to tests folder * fix: CDR-1401 move folder with keycloak import to tests folder * fix: CDR-1401 cleanup docker-compose and build_and_test * fix: CDR-1401 add KEYCLOAK_URL * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test pipeline * fix: CDR-1401 test with port 8081 in SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUERURI * fix: CDR-1401 change jwt issuer-uri to localhost * fix: CDR-1401 change jwt issuer-uri to keycloak:8081 * fix: CDR-1401 change SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUERURI and set env-file to docker compose command * fix: CDR-1401 change SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUERURI and unset env-file to docker compose command * fix: CDR-1401 remove jwt-issuer and security_authtype as they will be automatically appended during pipeline execution * fix: CDR-1401 enable BASIC AUTH tests * fix: CDR-1401 change KEYCLOAK_BASE_URL to http://keycloak:8081 * fix: CDR-1401 add keycloak docker service * fix: CDR-1401 remove links but use networks * fix: CDR-1401 add networks to the bottom * fix: CDR-1401 restore links * fix: CDR-1401 add keycloak to links from ehrbase * fix: CDR-1401 remove keycloak mention from docker-compose-int-test.yml * fix: CDR-1401 add keycloak to docker-compose-int-test.yml * fix: CDR-1401 add keycloak to docker-compose-int-test.yml links ehrbase service * fix: CDR-1401 remove links keycloak from ehrbase service * fix: CDR-1401 remove keycloak mentions * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: CDR-1401 fix docker compose file * fix: add ports to keycloak service * fix: change jwt-issueruri to localhost * fix: change pipeline for testing * fix: change pipeline for testing * fix: change KEYCLOAK_BASE_URL and host in SPRING_SECURITY_OAUTH2_RESOURCESERVER_JWT_ISSUERURI * fix: CDR-1401 test pipeline * fix: change port for KEYCLOAK_BASE_URL * fix: remove useless env vars for keycloak service * fix: test pipeline with keycloak:8080/auth... jwt.issuer-uri and adjust docker-compose.yml file * fix: CDR-1401 remove debug logs and enable all test suites * fix: CDR-1401 add AUTH_TYPE=BASIC for other tests than AUTH_TYPE ones * fix: CDR-1401 remove AUTH_TYPE from SANITY_TESTS * fix: CDR-1401 set AUTH_TYPE in .env.ehrbase when AUTH_TYPE=BASIC * fix: CDR-1401 add AUTH_TYPE in .env.ehrbase if it is set to BASIC or OAUTH * fix: CDR-1401 add AUTH_TYPE in .env.ehrbase in both BASIC and OAUTH types * fix: CDR-1401 enable all test suites * fix: CDR-1401 prepare for PR * fix: CDR-1401 get integration-tests using tag latest - ready for PR * fix: CDR-1401 enable back integration-tests tag latest-feature to make Robot tests passing in feature branch * fix: CDR-1401 rename Keycloak realm and client_id, provide new exported keycloak realm+users * fix: remove not used users and roles * fix: CDR-1401 restore latest tag for integration-tests
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Commits on Jun 7, 2024
Commits on Jun 10, 2024
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CDR-1330 AQL meta parameters default-limit, max-limit, max-fetch + fe…
…tch precedence strategies
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Merge pull request #1345 from ehrbase/feature/CDR-1479
Feature/cdr 1479
Commits on Jun 11, 2024
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Merge pull request #1333 from ehrbase/feature/CDR-1429-fix-broken-swa…
…gger-ui CDR-1429 Remove @Header schema that fails in spring doc 2.5.0
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[CDR-1453] Deprecate plugin functions
* Dependency inversion * Fixed typo * Changed * Deprecated plugin aspects * spotless * spotless * spotless --------- Co-authored-by: MBA <[email protected]>
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CDR-1487 Add workflow_run for robot PR reports (#1347)
* CDR-1487 Add workflow_run for robot PR reports * CDR-1487 Correct access token used for download
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Commits on Jun 12, 2024
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CDR-1487 Use workflow_run for robot PR reports (#1348)
* CDR-1487 Use workflow_run for robot PR reports * CDR-1487 Update workflow_run for robot PR reports
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Commits on Jun 17, 2024
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Create dedicated ehrbase use to run the container (#1336)
* Create dedicated ehrbase non-root user * Use root user in EHRbase Test image to prevent permission issues * Delete obsolete version attributes
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Bump net.bull.javamelody:javamelody-spring-boot-starter (#1340)
Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.98.0 to 1.99.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.98.0...javamelody-core-1.99.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump jooq.version from 3.19.8 to 3.19.10 (#1351)
Bumps `jooq.version` from 3.19.8 to 3.19.10. Updates `org.jooq:jooq` from 3.19.8 to 3.19.10 Updates `org.jooq:jooq-codegen-maven` from 3.19.8 to 3.19.10 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Commits on Jun 20, 2024
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Bump org.pf4j:pf4j-spring from 0.8.0 to 0.9.0 (#1320)
Bumps [org.pf4j:pf4j-spring](https://github.com/pf4j/pf4j-spring) from 0.8.0 to 0.9.0. - [Release notes](https://github.com/pf4j/pf4j-spring/releases) - [Changelog](https://github.com/pf4j/pf4j-spring/blob/master/CHANGELOG.md) - [Commits](pf4j/pf4j-spring@release-0.8.0...release-0.9.0) --- updated-dependencies: - dependency-name: org.pf4j:pf4j-spring dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Commits on Jun 21, 2024
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[CDR-1471] Align template controller with latest spec (#1334)
* Align template controller with latest spec * Add suggestion from Code review
Commits on Jun 25, 2024
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Bump org.apache.maven.plugins:maven-failsafe-plugin from 3.2.5 to 3.3…
….0 (#1354) Bumps [org.apache.maven.plugins:maven-failsafe-plugin](https://github.com/apache/maven-surefire) from 3.2.5 to 3.3.0. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.2.5...surefire-3.3.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-failsafe-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.apache.maven.plugins:maven-dependency-plugin (#1356)
Bumps [org.apache.maven.plugins:maven-dependency-plugin](https://github.com/apache/maven-dependency-plugin) from 3.6.1 to 3.7.1. - [Release notes](https://github.com/apache/maven-dependency-plugin/releases) - [Commits](apache/maven-dependency-plugin@maven-dependency-plugin-3.6.1...maven-dependency-plugin-3.7.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-dependency-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Commits on Jun 26, 2024
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CDR-909 Make release pipeline independent from SDK release (#1360)
- Ensure the SDK is not checked out and build during release - Add new profile that checks for -SNAPSHOT deps - Run -SNAPSHOT check before starting the release build
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Commits on Jun 27, 2024
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Bump docker/build-push-action from 5 to 6 (#1357)
* Bump docker/build-push-action from 5 to 6 Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 5 to 6. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v5...v6) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <[email protected]> Disable docker/build-push-action@6 summary for jacoco cli image --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: alexlehn <[email protected]>
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Bump io.micrometer:micrometer-registry-prometheus from 1.12.6 to 1.13…
….1 (#1350) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.12.6 to 1.13.1. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.12.6...v1.13.1) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Commits on Jul 8, 2024
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Bump org.codehaus.mojo:versions-maven-plugin from 2.16.2 to 2.17.0 (#…
…1367) Bumps [org.codehaus.mojo:versions-maven-plugin](https://github.com/mojohaus/versions) from 2.16.2 to 2.17.0. - [Release notes](https://github.com/mojohaus/versions/releases) - [Changelog](https://github.com/mojohaus/versions/blob/master/ReleaseNotes.md) - [Commits](mojohaus/versions@2.16.2...2.17.0) --- updated-dependencies: - dependency-name: org.codehaus.mojo:versions-maven-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.sonatype.plugins:nexus-staging-maven-plugin (#1365)
Bumps org.sonatype.plugins:nexus-staging-maven-plugin from 1.6.13 to 1.7.0. --- updated-dependencies: - dependency-name: org.sonatype.plugins:nexus-staging-maven-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.springdoc:springdoc-openapi-starter-webmvc-ui (#1366)
Bumps [org.springdoc:springdoc-openapi-starter-webmvc-ui](https://github.com/springdoc/springdoc-openapi) from 2.5.0 to 2.6.0. - [Release notes](https://github.com/springdoc/springdoc-openapi/releases) - [Changelog](https://github.com/springdoc/springdoc-openapi/blob/main/CHANGELOG.md) - [Commits](springdoc/springdoc-openapi@v2.5.0...v2.6.0) --- updated-dependencies: - dependency-name: org.springdoc:springdoc-openapi-starter-webmvc-ui dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.1 to 3.5…
….0 (#1370) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.1 to 3.5.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.1...enforcer-3.5.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump com.fasterxml.jackson:jackson-bom from 2.17.1 to 2.17.2 (#1369)
Bumps [com.fasterxml.jackson:jackson-bom](https://github.com/FasterXML/jackson-bom) from 2.17.1 to 2.17.2. - [Commits](FasterXML/jackson-bom@jackson-bom-2.17.1...jackson-bom-2.17.2) --- updated-dependencies: - dependency-name: com.fasterxml.jackson:jackson-bom dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Commits on Jul 11, 2024
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[CDR-1460] Align EHR controller with 1.0.3 spec (#1371)
* Align EHR controller with 1.0.3 spec * Fix sonar issues * Use latest integration tests
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Merge pull request #1358 from ehrbase/feature/CDR-1456-omit-target-types
Feature/cdr 1456 omit target types
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Commits on Jul 12, 2024
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Only apply the createRestContext to methods which were not covered an…
…d remove it from generic responseBuilder
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Commits on Jul 15, 2024
Commits on Jul 16, 2024
Commits on Jul 17, 2024
Commits on Jul 22, 2024
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Merge pull request #1359 from ehrbase/feature/CDR-1456_parentNum
Feature/cdr 1456 parent num
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Commits on Jul 24, 2024
Commits on Jul 25, 2024
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fix: CDR-1451 enable Robot tests with tags located in integration-tes…
…ts:latest-feature
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fix: CDR-1451 enable Robot tests with tags located in integration-tes…
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Commits on Jul 30, 2024
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[CDR-1506] validate ehrstatus flags (#1377)
* CDR-1506 Adjust EHR_STATUS validation * CDR-1506 Provide EHR ID and Status for creation * feat: CDR-1506 take Robot tests based on docker image latest-feature_CDR-1506_adjust_tests_ehr * CDR-1506 Consistent return type for EHRService --------- Co-authored-by: vladislavploaia <[email protected]>
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[CDR-1466] Fix AQL on Media file cluster with inline data (#1380)
* Use single jsonb select for byte values * Prevent Base64 encoding of byte[] in structure serialization * Cleanup and test BYTE single value handling * Ensure byte[] base64 is handled properly in Db/Rm json * Adopt OpenEHR_SDK base64 changed * Use latest 2.17.0 OpenEHR SDK --------- Co-authored-by: vladislavploaia <[email protected]>
Commits on Aug 8, 2024
Commits on Aug 9, 2024
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Merge pull request #1385 from ehrbase/feature/CDR-1530-fix-ehrscrape-…
…comp-not-exist-500 CDR-1530 Fix ehrscape comp get by return proper 404
Commits on Aug 12, 2024
Commits on Aug 13, 2024
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Merge pull request #1343 from ehrbase/feature/CDR-1451-basic-tag-support
[CDR-1451] Basic ItemTag support
Commits on Aug 15, 2024
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CDR-1532 Add EHRbase CLI to support pre migrations (#1387)
* CDR-1532 Add EHRbase CLI to support pre migrations * CDR-1532 Add unit test for CLI package * CDR-1532 Add CI test for EHRbase CLI * CDR-1532 Add suggestion from code review * CDR-1532 Update changelog
Commits on Aug 16, 2024
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CDR-1325 Enable Performance tests to Build and Test pipeline (#1390)
* feat: CDR-1325 add docker service to start docker container with perf tests * CDR-1325 disable Robot tests and enable logs for perf-tests * fix: add separate pipeline yml definition for Perf docker services * fix: CDR-1325 adjust starting docker compose * fix: CDR-1325 wait for WebTester to be ready * fix: CDR-1325 wait for WebTester to be ready - pipeline update * fix: CDR-1325 provide port to webtester in docker file * fix: CDR-1325 wait for webtester to be up * fix: CDR-1325 use correct docker compose command * fix: CDR-1325 get docker compose file from tests folder * fix: CDR-1325 get docker compose file from tests folder * fix: CDR-1325 wait for webtester to be up * fix: CDR-1325 get all perf test plans * fix: CDR-1325 get all perf test plans * fix: CDR-1325 start perf test plan * CDR-1325 add perf test plans and use Github action to run perf tests * CDR-1325 change host to run perf tests * CDR-1325 change where report is stored * CDR-1325 change where report is stored * CDR-1325 change where report is stored * CDR-1325 change from where result.jtl should be taken to be uploaded * CDR-1325 use different image to run perf tests * fix: add command to docker service * fix: add command to docker service * fix: test pipeline * fix: test pipeline * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: test pipeline with jmeter - check status of EHRBase * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * fix: use docker service to start jmeter * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * CDR-1325 matrix configuration enabled for different auth types * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 rotate jmeter results to have stored 3 latest ones * fix: CDR-1325 organize JMeter results and reports in folders and upload them to run * fix: CDR-1325 organize JMeter results and reports in folders and upload them to run * fix: remove useless docker compose file * Update build_and_test.yml * Update docker-compose-perf-test.yml * Update build_and_test.yml Update threads group configuration. Set default to: THREADS: 10 RAMP_UP: 1 LOOP_COUNT: 50 DURATION: 360 * Update build_and_test.yml Update threads duration to 180s * fix: CDR-1325 use ehrbase/ehrbase:build for performance tests * fix: CDR-1325 use ehrbase/ehrbase:build for performance tests and wait for jmeter service to be running * fix: CDR-1325 remove performance-test-run from needs array in docker-build-push
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CDR-1532 Update Postgres v15 migration (#1389)
* CDR-1532 Update Postgres v15 migration * CDR-1532 Remove temporary indicis for Postgres v15 migration * CDR-1532 Remove pre-flight capability for v15 migration * CDR-1532 Re-Add temporary migration indicies for v15 migration * CDR-1532 Add suggestion from code review for migration v15 * CDR-1532 Add old flyway checksum
Commits on Aug 27, 2024
Commits on Sep 3, 2024
Commits on Sep 4, 2024
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CDR-1259 make template delete independent of calling service
# Conflicts: # service/src/main/java/org/ehrbase/service/KnowledgeCacheServiceImp.java
Commits on Sep 16, 2024
Commits on Sep 17, 2024
Commits on Sep 25, 2024
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Add proper health check for Jmeter Docker container (#1403)
fix: add restart jmeter & add Jmeter health check
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Enable user access to the welcome page while authentication is enabled (
#1400) * Enhance security configuration and user access to the welcome page * Update CHANGELOG.md * Run spotless:apply
Commits on Sep 26, 2024
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CDR-1596 Support query parameter with multiple values (#1399)
* CDR-1596 Support query parameter with multiple values * CDR-1596 changelog * CDR-1596 prevent NPE in AqlQueryRequest::rewriteExplicitParameterTypes * CDR-1596 parameterized tests for AqlParameterReplacement
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Merge remote-tracking branch 'origin/feature/CDR-1580-fix-ehr_status-…
…if-match' into feature/CDR-1580-fix-ehr_status-if-match
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Commits on Sep 27, 2024
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Merge pull request #1404 from ehrbase/feature/CDR-1580-fix-ehr_status…
…-if-match-2 Feature/cdr 1580 fix ehr status if match 2
Commits on Sep 30, 2024
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Merge pull request #1405 from ehrbase/feature/CDR-1597-fix-query-cache
CDR-1597 aql query storage: evict correct entries from cache
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Bump spring-boot.version from 3.2.5 to 3.3.4 (#1402)
Bumps `spring-boot.version` from 3.2.5 to 3.3.4. Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.2.5 to 3.3.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.2.5...v3.3.4) Updates `org.springframework.boot:spring-boot-dependencies` from 3.2.5 to 3.3.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.2.5...v3.3.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.2.5 to 3.3.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.2.5...v3.3.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-minor - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-minor - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Commits on Oct 1, 2024
Commits on Oct 2, 2024
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Merge remote-tracking branch 'origin/feature/fix-stored-aql-not-exist…
…' into feature/fix-stored-aql-not-exist # Conflicts: # service/src/main/java/org/ehrbase/service/StoredQueryServiceImp.java
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Merge pull request #1409 from ehrbase/feature/fix-stored-aql-not-exist
Fix HTTP 500 in case stored query does not exist
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Commits on Oct 3, 2024
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Merge branch 'develop' into feature/CDR-1207
# Conflicts: # service/src/main/java/org/ehrbase/service/StoredQueryServiceImp.java
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Commits on Oct 11, 2024
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CDR-1609 Property for enabling ehrscape API (default: false) (#1415)
* CDR-1609 Property for enabling ehrscape API (default: false) * CDR-1609 Do not scan rest-ehrscape beans in rest-openehr module * CDR-1609 enable ehrscape for robot tests in github actions * CDR-1609 update CHANGELOG * CDR-1609 Add ehrscape hint to UPDATING.md --------- Co-authored-by: alexlehn <[email protected]>
Commits on Oct 24, 2024
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CDR-1580 Add Basic AQL on FOLDER support (#1401)
* CDR-1580 Add Basic AQL on FOLDER support * CDR-1580 Add AQL support got FOLDER contains COMPOSITION * CDR-1580 Add Basic AQL on FOLDER support * CDR-1580 Add AQL support got FOLDER contains COMPOSITION * CDR-1580 AQL on folder Cleanup * CDR-1580 Adjust feature checks for AQL on Folder * CDR-1580 Add AQL support for FOLDER contains COMPOSITION * CDR-1551 AQL on FOLDER allow nested contains * CDR-1551 AQL on FOLDER use item array query based on ehr id and idx * CDR-1551 AQL on FOLDER update changelog * CDR-1551 AQL on Folder change generated SQL to flat representation * CDR-1551 AQL on Folder correct SQL alias naming * CDR-1551 AQL on Folder fix broken test * CDR-1551 Adjust Folder join ASL * CDR-1551 Extract Join Conditions * CDR-1551 Handle Version and Data queries * CDR-1551 Change AQL configuration * CDR-1551 Fix missing static declaration of BeanPostProcessor * CDR-1551 cleanup changes * CDR-1551 cleanup * CDR-1551 review changes * Update CHANGELOG.md * CDR-1551 renamed AslFolderItemIdValuesColumnField to AslFolderItemIdVirtualField * CDR-1551 fix tests --------- Co-authored-by: Holger Reise <[email protected]> Co-authored-by: HolgerReiseVSys <[email protected]>
3 people authoredOct 24, 2024 -
Bump org.pf4j:pf4j from 3.11.1 to 3.12.1 (#1416)
Bumps [org.pf4j:pf4j](https://github.com/pf4j/pf4j) from 3.11.1 to 3.12.1. - [Release notes](https://github.com/pf4j/pf4j/releases) - [Changelog](https://github.com/pf4j/pf4j/blob/master/CHANGELOG.md) - [Commits](pf4j/pf4j@release-3.11.1...release-3.12.1) --- updated-dependencies: - dependency-name: org.pf4j:pf4j dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump joonvena/robotframework-reporter-action from 2.4 to 2.5 (#1372)
Bumps [joonvena/robotframework-reporter-action](https://github.com/joonvena/robotframework-reporter-action) from 2.4 to 2.5. - [Release notes](https://github.com/joonvena/robotframework-reporter-action/releases) - [Commits](joonvena/robotframework-reporter-action@v2.4...v2.5) --- updated-dependencies: - dependency-name: joonvena/robotframework-reporter-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: stefanspiska <[email protected]>
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Bump org.apache.maven.plugins:maven-surefire-plugin from 3.2.5 to 3.5…
….1 (#1414) Bumps [org.apache.maven.plugins:maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.2.5 to 3.5.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.2.5...surefire-3.5.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-surefire-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.apache.maven.plugins:maven-gpg-plugin from 3.2.4 to 3.2.7 (#…
…1413) Bumps [org.apache.maven.plugins:maven-gpg-plugin](https://github.com/apache/maven-gpg-plugin) from 3.2.4 to 3.2.7. - [Release notes](https://github.com/apache/maven-gpg-plugin/releases) - [Commits](apache/maven-gpg-plugin@maven-gpg-plugin-3.2.4...maven-gpg-plugin-3.2.7) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-gpg-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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Bump org.apache.maven.plugins:maven-failsafe-plugin from 3.3.0 to 3.5…
….1 (#1412) Bumps [org.apache.maven.plugins:maven-failsafe-plugin](https://github.com/apache/maven-surefire) from 3.3.0 to 3.5.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.3.0...surefire-3.5.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-failsafe-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Commits on Nov 5, 2024
Commits on Nov 6, 2024
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Merge pull request #1424 from ehrbase/feature/update_sdk2
Feature/update sdk2
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