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Update the ome-zarr channel #727

Merged
merged 627 commits into from
Sep 27, 2024
Merged

Update the ome-zarr channel #727

merged 627 commits into from
Sep 27, 2024

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bugraoezdemir
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AnniekStok and others added 30 commits March 19, 2024 08:52
in preparation of creating a python package out of it.
* Ran black for a more objective code style
* Fixed some type annotations (mostly in order to understand the better
  understand the code
* Added more docstrings mostly in order to better understand the code
* Ensured google-style docstrings
Note: This changes the behavior a bit. Previous version was opening the
tiff file and immediately unlinking the file, such that it was deleted
once tifffile closed the handle. However, this was not supported on
windows, where a blank try except was employed to hide it and also
obscure what was really happening. Now the behavior on all osses is the
same and users can employ the os-specific way to clean up their temp
folder.
would prefer to remove the special handling of fetching extra metadata
as it's also not used in the tutorial.
Typing gets ugly with the different return types.
it's also not really good practice.
Move OpenIJTIFF python to module/conda-package
@bugraoezdemir bugraoezdemir merged commit f18870a into ome-zarr Sep 27, 2024
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