pixi.toml

[project]
name = "bioinfo-tools"
version = "1.0.0"
description = "A suite of bioinformatics utilities for sequence analysis"
authors = ["Davi J. Marcon <davijosuemarcon@gmail.com>"]
channels = ["conda-forge", "bioconda"]
platforms = ["linux-64", "osx-64", "osx-arm64", "win-64"]

[dependencies]
python = ">=3.6"
biopython = ">=1.70"

[tasks]
install = "pip install -e ."
test = "python tests/test_scripts.py"
clean = "rm -rf build/ dist/ *.egg-info"

[feature.dev.dependencies]
pytest = "*"
black = "*"
flake8 = "*"

[feature.dev.tasks]
format = "black bioinfo_tools tests"
lint = "flake8 bioinfo_tools tests"
test-verbose = "pytest -v tests/"

[environments]
default = ["dev"]