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latest changes on pm calculation#8

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nianyic7 wants to merge 128 commits intomasterMP-Gadget/shenqi:masterfrom cudaportMP-Gadget/shenqi:cudaportCopy head branch name to clipboard

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Commits on Sep 20, 2024

• Add a flag to use CUDA code

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Commits on Sep 25, 2024

• memory allocation cudaMallocManaged

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• enforce mpicc for bigfile and pfft

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Commits on Sep 27, 2024

• replace gsl integration with boost first try on commoving distance

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Commits on Sep 28, 2024

• tanh_sinh integrator

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• cpp compatibility correction

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• cpp compat

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• cpp correction

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Commits on Sep 29, 2024

• tanh_sinh adaptive exact factor

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• cleanup

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• cosmology integrate adapted

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• modified lib to add Boost path

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• changed pfft calls/vars to cufft

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• changed pfft calls/vars to cufft in petapm.c

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• fixed typo in lib include

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Commits on Sep 30, 2024

• fixed cufft complex indexing

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• added cufft/cuda libs to Makefile.rules

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• some progress on pfft->cufftmp

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Commits on Oct 1, 2024

• add cuda stream to petapm struct

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• remove reion stuff; main changes to petapm_init, destroy, transfer function

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• errno system header macro conflict

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• neutrinos ira integ

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• omega nu integ

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• integrator abs err tolerance, Omnu timebin integ updated

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• power integ

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• migrate petapm-cufft.c to petapm.c

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Commits on Oct 2, 2024

• thermal init integ

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• some integ and interp (barycentric rational) cooling qso

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• Delete gsl using script from bigfile

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• Remove metal return code which is complex to port away from GSL and likely hard to run on GPU

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• cooling rates interp, redefine PartManager->Base due to macro conflicts, may rename P in future

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• neutrino interp

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Commits on Oct 3, 2024

• cleanup

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• modified task 2d decomp in petapm

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• rm previous default slab code->use pencil

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• clean up some reion stuff in petapm.h

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• rewrite petapm_init

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• rewrite r2c in petapm_force_r2c

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• modified c2r, almost done with petapm changes

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• added box structure to petapm

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• fixed compiler errors in petapm

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• pfft->cufft type change in zeldovich

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• fix cufft complex number indexing

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• pfft->cufft type in glass.c

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• bug fix: avoid floating-point precision issues and reduce the approximation order if data points are less

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Commits on Oct 4, 2024

• power interp

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• Remove random thermal velocity support

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• gravpm powerspec interp

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• omnu interp

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• pmesh rng boost mt

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• system random

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• gsl err ode

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• boost bessel

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Commits on Oct 5, 2024

• test to boost

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• test all to boost

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• back

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• for conflicts

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• Merge pull request #655 from astro-YYH/cudaport

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• Remove header connected with metal return

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• Remove largely unused lightcone

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• Remove old Options files

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• Remove GSL flags from build files

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• Remove gsl from build files

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• Some last GSL cleanups in the build system

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• Change default mpicc to mpic++

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• Adjust comment

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• Try to fix travis C++ build

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• Still need C compiler for bigfile

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• Install more c++ packages

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• Fix github workflow

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• Will this fix it

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• Try this

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• Restore the gcc version pin for mpich as it is still necessary

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• Add boost

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Commits on Oct 7, 2024

• modified lib to add Boost path

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• changed pfft calls/vars to cufft

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• changed pfft calls/vars to cufft in petapm.c

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• fixed typo in lib include

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• fixed cufft complex indexing

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• added cufft/cuda libs to Makefile.rules

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• some progress on pfft->cufftmp

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• add cuda stream to petapm struct

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• remove reion stuff; main changes to petapm_init, destroy, transfer function

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• migrate petapm-cufft.c to petapm.c

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  fb9766c

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• cleanup

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  5f86276

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• modified task 2d decomp in petapm

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  d80a2ae

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• rm previous default slab code->use pencil

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• clean up some reion stuff in petapm.h

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• rewrite petapm_init

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• rewrite r2c in petapm_force_r2c

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  3b5fbb5

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• modified c2r, almost done with petapm changes

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• added box structure to petapm

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• fixed compiler errors in petapm

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• pfft->cufft type change in zeldovich

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• fix cufft complex number indexing

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• pfft->cufft type in glass.c

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• Merge branch 'cufft' of https://github.com/nianyic7/MP-Gadget into cufft

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• comments/todos after talking to Yu

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• manually incorporate gravpm change from upstream

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• remove pfft/fftw3 dependency

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• remove plane and lenstool in compilation

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• add back plane.h just for getting things to run

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Commits on Oct 8, 2024

• Merge pull request #658 from nianyic7/cufft

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• Some fixes to travis tests

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• Remove pfft from makefiles

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• Remove last bits of EXCUR_REION

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• Merge branch 'master' into cudaport

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• Merge pull request #1 from MP-Gadget/cudaport

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• Update license with new name

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• added cufftmp, cuda, nvshmem libs/includes to Option.mk.vista

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Commits on Oct 10, 2024

• merged box struct into region

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• massive debugging petapm.c, almost works

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Commits on Oct 15, 2024

• Fix the OpenMP sort on ARM architectures.

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• Merge branch 'cudaport'

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• Remove stray GSL variable from makefile

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• Merge remote-tracking branch 'MPG/vistaopenmpfix'

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• Fix C++ compilation error

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Commits on Oct 18, 2024

• add compile rules for cuda kernels

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• add mpi include into cuda compile rules

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• add box iterator helper for cufftmp

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• move pm transfer functions to cuda kernel

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• adapt pm for kernel transfer functions (half done)

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• output obj files for cuda kernels

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• Use cudaMallocManaged by default

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• fix compiler error

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• Merge branch 'master' into cudaport

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• undo one commit from master for cudamalloc

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Commits on Nov 4, 2024

• latest updates from pm changes

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