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Pull requests: MDAnalysis/mdanalysis

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Pull requests list

Add benchmarks for MDAnalysis.analysis.align
#5298 opened Mar 10, 2026 by noir4201 Loading…
2 of 6 tasks
1
1
DOC: fix doctests in universe.py for newer NumPy and optional rdkit
#5297 opened Mar 10, 2026 by Kd1880 Loading…
4 of 6 tasks
2
Add no selection option to RMSD analysis class
#5296 opened Mar 9, 2026 by ollyfutur Loading…
5 of 6 tasks
@orbeckst
14
Add ASV benchmarks for MDAnalysis.lib core kernels
#5292 opened Mar 8, 2026 by Amarendra22 Loading…
2
Add ASV benchmark for Contacts analysis
#5291 opened Mar 8, 2026 by Amarendra22 Loading…
@orbeckst
2
Remove RTD labeller
#5288 opened Mar 7, 2026 by IAlibay Loading…
6 tasks done
1
3
DOC: fix doctest in util.py for greedy_splitext on Windows
#5285 opened Mar 7, 2026 by Kd1880 Loading…
2
DOC: fix doctest output in transformations.py for newer NumPy
#5283 opened Mar 6, 2026 by Kd1880 Loading…
4
Fix doctest examples in selections.rst (#3925)
#5276 opened Mar 4, 2026 by jamalfaisal Loading…
2 of 6 tasks
3
Implement pip dependency caching for Azure Pipelines
#5267 opened Mar 1, 2026 by unnatikdm Loading…
4 of 6 tasks
1
8
fixed multiple typos in python files more information needed Please reply to requests for information or the issue will be closed.
#5263 opened Feb 28, 2026 by jyothiswaroopch Loading…
1 of 6 tasks
5
Improve developer effectiveness: unify quality gates, add Ruff linting, and fast smoke tests
#5262 opened Feb 28, 2026 by Manikantasai1724 Loading…
9
Fix typo in benchmark documentation more information needed Please reply to requests for information or the issue will be closed.
#5258 opened Feb 27, 2026 by ishasinghrathore37 Loading…
3
fixed _conclude() for msd.py for non_linear frames
#5254 opened Feb 26, 2026 by spyke7 Loading…
5 of 6 tasks
1
@BradyAJohnston
1
Optimize inverse index mapping in groups.py (Fixes Issue #3387)
#5252 opened Feb 26, 2026 by aygarwal Loading…
4 of 6 tasks
1
@orbeckst
10
Fix XDR indentation issue and update sphinx config more information needed Please reply to requests for information or the issue will be closed.
#5250 opened Feb 25, 2026 by AkshitBoora Loading…
@jeremyleung521
6
Fix #5100: Auto-switch to non-linear MSD for custom frames
#5244 opened Feb 22, 2026 by Shreya2005-2005 Loading…
1
Add backends support for minimize_vectors Component-lib enhancement
#5235 opened Feb 18, 2026 by PardhavMaradani Loading…
6 tasks done
18
Adding guards to index assignment in Universe creation
#5228 opened Feb 10, 2026 by Akshat-Raj Loading…
1 task
1
4
Inserted the unit of Mass
#5214 opened Jan 26, 2026 by Lakshya2031 Loading…
6 tasks
1
@orbeckst
8
Use spawn start method for multiprocessing inside the test to avoid deadlock/timeout
#5213 opened Jan 21, 2026 by yuxuanzhuang Loading…
4 of 6 tasks
1
@orbeckst
3
Docs: Fix doctest failures in align.py
#5207 opened Jan 15, 2026 by IAyaanHere Loading…
4 of 6 tasks
3
Test: Check for missing coordinates in LAMMPS DumpReader
#5206 opened Jan 14, 2026 by IAyaanHere Loading…
4 of 6 tasks
1
@BradyAJohnston
6
Add cylindrical selection test using PeriodicKDTree
#5194 opened Dec 30, 2025 by rishinamdev17 Loading…
2 of 5 tasks
1
@BradyAJohnston
17
Implement scipy.spatial.cKDTree for orthorhombic and no PBC
#5193 opened Dec 29, 2025 by Aryaman-Chaudhri Loading…
5 tasks done
1
@BradyAJohnston
6
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