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@JhuangLab

JhuangLab

Biomedical data analysis tools developed in Jinyan Huang Bioinformatics Lab.

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  1. BioInstaller BioInstaller Public

    A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

    R 56 12

  2. ngstk ngstk Public

    A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.

    R 19 5

  3. qap qap Public

    Forked from mingjiewang/qap

    quasispecies analysis package

    Roff

  4. EWASpaper EWASpaper Public

    Leveraging biological and statistical covariates improves the detection power in epigenome-wide association testing

    R 1 1

  5. CytoTree CytoTree Public

    A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data

    R 27 8

Repositories

Showing 10 of 21 repositories
  • IMCpaper Public

    A clinically relevant spatial single-cell landscape of pancreatic cancer

    JhuangLab/IMCpaper’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 31, 2025
  • twist2 Public

    TWIST2 high expression defines a new subtype of B-cell precursor acute lymphoblastic leukemia

    JhuangLab/twist2’s past year of commit activity
    CSS 0 0 0 0 Updated Mar 31, 2025
  • embryo Public

    Spatiotemporal Metabolic Atlas of Mammalian Organogenesis

    JhuangLab/embryo’s past year of commit activity
    0 0 0 0 Updated Mar 18, 2025
  • sdc1_mac Public

    SDC1 Macrophage

    JhuangLab/sdc1_mac’s past year of commit activity
    JavaScript 0 0 0 0 Updated Mar 18, 2025
  • healthman Public Forked from huboqiang/healthman

    code for "A comparative cohort study of post-COVID-19 conditions based on 23,838 individuals’ physical examination records in China"

    JhuangLab/healthman’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 1 0 0 Updated Jul 1, 2024
  • BioInstaller Public

    A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

    JhuangLab/BioInstaller’s past year of commit activity
    R 56 12 12 0 Updated Jan 8, 2023
  • hyperion Public

    A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

    JhuangLab/hyperion’s past year of commit activity
    R 0 0 0 0 Updated Nov 10, 2022
  • imctoolkits Public

    A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

    JhuangLab/imctoolkits’s past year of commit activity
    R 0 0 0 0 Updated Aug 24, 2022
  • CytoTree Public

    A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data

    JhuangLab/CytoTree’s past year of commit activity
    R 27 8 9 0 Updated Nov 8, 2020
  • CytoTree-dataset Public

    Datasets and code for CytoTree

    JhuangLab/CytoTree-dataset’s past year of commit activity
    HTML 0 GPL-3.0 1 0 0 Updated Oct 31, 2020
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