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Joint BioEnergy Institute

29 followers
5885 Hollis St, Emeryville, CA 94608
http://jbei.org

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ice ice Public

Web based Registry platform for managing synthetic biological parts

Java 41 24

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Showing 10 of 49 repositories

foldy-internal Public
Internal foldy

JBEI/foldy-internal’s past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Sep 25, 2025
Isoprenol_CRISPRi Public
Using data driving approaches with CRISPRi to improve isoprenol TRY

JBEI/Isoprenol_CRISPRi’s past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Sep 22, 2025
ART Public
A machine learning tool to improve the effectiveness of strain engineering in synthetic biology

JBEI/ART’s past year of commit activity

Jupyter Notebook 58 20 0 0 Updated Sep 18, 2025
HamiltonVantage-Yeast_Transformation Public

JBEI/HamiltonVantage-Yeast_Transformation’s past year of commit activity

ReScript 0 0 0 0 Updated Sep 9, 2025
BioPKS-Pipeline Public

JBEI/BioPKS-Pipeline’s past year of commit activity

Jupyter Notebook 2 0 0 0 Updated Aug 10, 2025
foldy Public
Foldy: a web-based platform for interactive protein structure analysis

JBEI/foldy’s past year of commit activity

TypeScript 23 3 14 0 Updated Aug 6, 2025
bayflux Public
Software tool for Bayesian genome scale 13C Metabolic Flux Analysis

JBEI/bayflux’s past year of commit activity

Jupyter Notebook 7 2 0 0 Updated Jun 26, 2025
RetroTide Public
PKS Retrobiosynthesis Tool

JBEI/RetroTide’s past year of commit activity

Jupyter Notebook 0 1 0 0 Updated Mar 31, 2025
Flaviolin_media_opt_C3 Public
Data and notebooks for campaign 2 (C2) of media optimization for maximizing flaviolin yield in P. putida.

JBEI/Flaviolin_media_opt_C3’s past year of commit activity

Jupyter Notebook 1 0 0 0 Updated Mar 27, 2025
Flaviolin_media_opt_C2 Public
Data and notebooks for campaign 2 (C2) of media optimization for maximizing flaviolin titer in P. putida.

JBEI/Flaviolin_media_opt_C2’s past year of commit activity

Jupyter Notebook 1 0 0 0 Updated Mar 27, 2025

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