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Releases: ImmuneDynamics/Spectre

v1.1.0

12 Nov 07:31
@tomashhurst tomashhurst
v1.1.0
89df6a0
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v1.1.0 Latest
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In v1.1 we have removed the package dependencies rgeos and rgdal as these are no longer available on CRAN. The package should install fine without these dependencies, but some spatial functions may not work properly. If required, one can download the archived packages, unzip them, and then placed them in the R library location.

To install, please see our instructions on our getting started page.

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.3.4 (2023-10-31)
  • RStudio version: 2023.3.0.386
Assets 2
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v1.0.0

03 Sep 06:13
@tomashhurst tomashhurst
v1.0.0
620e784
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v1.0.0

Installation: to install this version using R or Docker, see our getting started page.

Updates:

  • Major updates to our spatial analysis functions and workflows
  • Re-organisation of workflow folders structures

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.1.1 (2021-08-10)
  • RStudio version: v1.4.1717

Windows:

  • OS: Windows 10 x64
  • R version: v4.1.0 (2021-05-24)
  • RStudio version: v1.4.1717
Assets 4
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v0.5.5

24 Jun 09:53
@tomashhurst tomashhurst
v0.5.5
f6648ab
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v0.5.5

Installation: to install this version using R or Docker, see our getting started page.

Updates:

  • Fixes to issues created by the update to CytoNorm

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.1.0 (2021-05-24)
  • RStudio version: v1.4.1717

Windows:

  • OS: Windows 10 x64
  • R version: v4.1.0 (2021-05-24)
  • RStudio version: v1.4.1717
Assets 2
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v0.5.4

19 Jun 09:29
@tomashhurst tomashhurst
v0.5.4
4de3f57
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v0.5.4

Installation: to install this version, see our getting started page.

Updates:

  • Updates to the installation process -- specifically removing hdf5r dependency, which is not required and necessitated additional brewer installations, and replaced it with rhdf5 from Bioconductor.

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717

Windows:

  • OS: Windows 10 x64
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717
Assets 2
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v0.5.3

19 Jun 06:03
@tomashhurst tomashhurst
v0.5.3
646e9b4
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v0.5.3

Installation: to install this version, see our getting started page.

Updates:

  • Updates to the do.create.outlines function for dealing with polygon shapes and cell masks.
  • Updates to the package.check function for clarity.

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717

Windows:

  • OS: Windows 10 x64
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717
Assets 2
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v0.5.2

18 Jun 11:19
@tomashhurst tomashhurst
v0.5.2
11425a9
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v0.5.2

Installation: to install this version, see our getting started page.

Updates:

  • Updates and improvements relating to the installation of dependencies.
  • Fixes for spatial analysis functions.
  • Modifications to make.colour.plot defaults to improve visualisation for figures.

R session information at time of release:

Mac:

  • OS: macOS Catalina 10.15.7
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717

Windows:

  • OS: Windows 10 x64
  • R version: v4.1.0 (2021-05-18)
  • RStudio version: v1.4.1717
Assets 2
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v0.5.1

18 Jun 06:09
@tomashhurst tomashhurst
v0.5.1
c55cc05
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v0.5.1

Fixes for spatial analysis functions.

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v0.5.0

04 Jun 04:04
@tomashhurst tomashhurst
v0.5.0
c039bd3
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v0.5.0

Major update -- spatial analysis functions incorporated directly in Spectre.

Assets 2
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v0.4.7

03 Jun 07:47
@tomashhurst tomashhurst
v0.4.7
ef6d432
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v0.4.7 
Update DESCRIPTION
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v0.4.6

31 May 01:23
@tomashhurst tomashhurst
v0.4.6
8fcf9f4
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v0.4.6 
Update DESCRIPTION
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