This repository has been archived by the owner on May 18, 2018. It is now read-only.
- Simulation runtime improvements now enable tHapMix to complete simulation in under 70min on a large multi-core Linux node, which is ~3.5 faster than results from previous versions
- tHapMix now includes a utility tool to (a) estimate distribution of somatic CNV features, such as size, from a list of vcf files and (b) create JSON file of the distribution as input into tHapMix. This will allow tHapMix to simulate variants by using distributions of CNV features previously observed in sequenced tumour samples
- New binary archive installation options via setuptools that automates installation of all dependences