Add null_hypothesis_tsmap_output.npy to snakemake output #5
Annotations
1 error and 2 warnings
Build the article PDF
exec: Building DAG of jobs...
Your conda installation is not configured to use strict channel priorities. This is however crucial for having robust and correct environments (for details, see https://conda-forge.org/docs/user/tipsandtricks.html). Please consider to configure strict priorities by executing 'conda config --set channel_priority strict'.
Creating conda environment /home/runner/.conda/lib/python3.10/site-packages/showyourwork/workflow/envs/tectonic.yml...
Downloading and installing remote packages.
Environment for /home/runner/.conda/lib/python3.10/site-packages/showyourwork/workflow/envs/tectonic.yml created (location: .snakemake/conda/1de43e949e566b1fdaa2fb532335b185_)
Using shell: /usr/bin/bash
Provided cores: 1 (use --cores to define parallelism)
Rules claiming more threads will be scaled down.
Job stats:
job count min threads max threads
--------------------- ------- ------------- -------------
syw__main 1 1 1
syw__preprocess 1 1 1
syw__preprocess_setup 1 1 1
syw__preprocess_xml 1 1 1
total 4 1 1
Select jobs to execute...
[Thu Jan 16 10:45:06 2025]
Job 3: Preprocess: Setting up...
Reason: Missing output files: /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/xstring.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork.otf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/lineno.sty, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork-logo.pdf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/listofitems.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork-stamp.pdf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/ms.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/xstring.sty, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork.tex
Preprocess: Setting up...
[Thu Jan 16 10:45:06 2025]
Finished job 3.
1 of 4 steps (25%) done
Select jobs to execute...
[Thu Jan 16 10:45:06 2025]
Job 2: Preprocess: Generating XML tree...
Reason: Missing output files: /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork.xml; Input files updated by another job: /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/xstring.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork.otf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/lineno.sty, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork-logo.pdf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/listofitems.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork-stamp.pdf, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/ms.tex, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/xstring.sty, /home/runner/work/reproducible-fermi-lat/reproducible-fermi-lat/.showyourwork/preprocess/showyourwork.tex
Preprocess: Generating XML tree...
Activating conda environment: .snakemake/conda/1de43e949e566b1fdaa2fb532335b185_
warning: ms.tex:74: Underfull /hbox (badness 10000) in paragraph at lines 74--74
warning: ms.tex:74: Missing character: There is no ��� ("201C) in font t1xr!
warning: could not represent character "“" (0x201c) in font "t1xr"
warning: you may need to load
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Build the article PDF
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "showyourwork-logs".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
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showyourwork-logs
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1.16 MB |
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