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Merge pull request #237 from costateixeira/linux-docker
Linux installer and docker
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,87 +1,79 @@ | ||
| on: | ||
| # Trigger the workflow on push or pull request, | ||
| # but only for the main branch | ||
| push: | ||
| branches: | ||
| - master | ||
| # pull_request: | ||
| jobs: | ||
| Build-Docker-Image: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Check out repository code | ||
| uses: actions/checkout@v2 | ||
| # - | ||
| # name: Login to Docker Hub | ||
| # uses: docker/login-action@v2 | ||
| # with: | ||
| # username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| # password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: Cache terminology files | ||
| uses: actions/cache@v2 | ||
| with: | ||
| path: ~/terminology | ||
| key: terminology-${{ github.sha }} | ||
| restore-keys: terminology- | ||
| - name: Setup MySQL | ||
| run: | | ||
| docker network create gh | ||
| docker run \ | ||
| --network gh \ | ||
| --name mysql \ | ||
| -e MYSQL_ROOT_PASSWORD=test \ | ||
| -e MYSQL_USER=test \ | ||
| -e MYSQL_PASSWORD=test \ | ||
| -e MYSQL_DATABASE=test \ | ||
| -d mysql:8 | ||
| - name: Docker Build | ||
| run: | | ||
| docker build \ | ||
| --tag fhirserver \ | ||
| . | ||
| # - name: Scan Code | ||
| # run: | | ||
| # export DISPLAY=0:0 | ||
| # docker run --entrypoint /work/fhirserver/utilities/codescan/codescan fhirserver /work/bootstrap | ||
| - name: Prepare ini file | ||
| env: | ||
| FHIRSERVER_LOCATIONS_CLONE_PATH: /work/fhirserver | ||
| FHIRSERVER_LOCATIONS_TEST_CASES_CLONE_PATH: /work/bootstrap/source/fhir-test-cases | ||
| FHIRSERVER_LOCATIONS_MARKDOWN_CLONE_PATH: /work/bootstrap/source/delphi-markdown | ||
| FHIRSERVER_LOCATIONS_SNOMED_CACHE_PATH: /terminology/fhir-server/snomed.test.cache | ||
| FHIRSERVER_MYSQL_SERVER: mysql | ||
| FHIRSERVER_EMAIL_SENDER: [email protected] | ||
| FHIRSERVER_EMAIL_DESTINATION: [email protected] | ||
| FHIRSERVER_EMAIL_PASSWORD: ${{ secrets.FHIRSERVER_EMAIL_PASSWORD }} | ||
| FHIRSERVER_SSL_CERT_PATH: /work/fhirserver/fixtures/domain.crt | ||
| FHIRSERVER_SSL_KEY_PATH: /work/fhirserver/fixtures/domain.key | ||
| FHIRSERVER_SSL_CACERT_PATH: /work/fhirserver/fixtures/rootCA.crt | ||
| FHIRSERVER_SSL_PASSWORD: password | ||
| run: | | ||
| cat fixtures/test-settings.ini.template | envsubst > ~/test-settings.ini | ||
| - name: Ensure SNOMED cache is present | ||
| run: | | ||
| mkdir -p ~/terminology/fhir-server | ||
| wget -q --no-clobber https://storage.googleapis.com/ig-build/snomed.test.cache -O ~/terminology/fhir-server/snomed.test.cache || true | ||
| ls ~/terminology/fhir-server/snomed.test.cache | ||
| - name: Run tests in docker | ||
| run: | | ||
| docker images --all | ||
| docker run \ | ||
| --network gh \ | ||
| -v ~/terminology:/terminology \ | ||
| -v ~/test-settings.ini:/work/fhirserver/exec/64/test-settings.ini \ | ||
| fhirserver -tests | ||
| # - name: Tag and push Docker image | ||
| # run: | | ||
| # # Extract the FHIR server version from the library/version.inc file | ||
| # FHIR_VERSION=$(grep -oP "FHIR_CODE_FULL_VERSION = '\K[^']+" library/version.inc) | ||
| # | ||
| # # Tag the Docker image with the extracted version and "latest" | ||
| # docker tag fhirserver ${{ secrets.DOCKERHUB_USERNAME }}/fhirserver:$FHIR_VERSION | ||
| # docker tag fhirserver ${{ secrets.DOCKERHUB_USERNAME }}/fhirserver:latest | ||
| # | ||
| # # Push both tagged images to Docker Hub | ||
| # docker push ${{ secrets.DOCKERHUB_USERNAME }}/fhirserver:$FHIR_VERSION | ||
| # docker push ${{ secrets.DOCKERHUB_USERNAME }}/fhirserver:latest | ||
| name: Build and Push Docker Image to GHCR | ||
|
|
||
| on: | ||
| # Trigger the workflow on push or pull request for the main branch | ||
| push: | ||
| pull_request: | ||
|
|
||
| jobs: | ||
| Build-Docker-Image: | ||
| runs-on: ubuntu-latest | ||
|
|
||
| steps: | ||
| # Step 1: Check out the repository code | ||
| - name: Check out repository code | ||
| uses: actions/checkout@v2 | ||
|
|
||
| # Step 2: Log in to GitHub Container Registry (GHCR) | ||
| - name: Log in to GitHub Container Registry | ||
| uses: docker/login-action@v2 | ||
| with: | ||
| registry: ghcr.io | ||
| username: ${{ github.actor }} | ||
| password: ${{ secrets.GITHUB_TOKEN }} # Automatically provided by GitHub | ||
|
|
||
| # Step 3: Cache terminology files (optional, to avoid re-downloading terminology files) | ||
| - name: Cache terminology files | ||
| uses: actions/cache@v2 | ||
| with: | ||
| path: ~/terminology | ||
| key: terminology-${{ github.sha }} | ||
| restore-keys: terminology- | ||
|
|
||
| # Step 4: Setup MySQL for the build | ||
| - name: Setup MySQL | ||
| run: | | ||
| docker network create gh | ||
| docker run \ | ||
| --network gh \ | ||
| --name mysql \ | ||
| -e MYSQL_ROOT_PASSWORD=test \ | ||
| -e MYSQL_USER=test \ | ||
| -e MYSQL_PASSWORD=test \ | ||
| -e MYSQL_DATABASE=test \ | ||
| -d mysql:8 | ||
| # Step 5: Build the Docker image and tag it for GitHub Container Registry (GHCR) | ||
| - name: Docker Build | ||
| run: | | ||
| docker build --tag ghcr.io/${{ github.repository_owner }}/fhirserver:nightly . | ||
| # Step 6: Prepare ini file for your FHIR Server with environment variables | ||
| - name: Prepare ini file | ||
| env: | ||
| FHIRSERVER_LOCATIONS_CLONE_PATH: /work/fhirserver | ||
| FHIRSERVER_LOCATIONS_TEST_CASES_CLONE_PATH: /work/bootstrap/source/fhir-test-cases | ||
| FHIRSERVER_LOCATIONS_MARKDOWN_CLONE_PATH: /work/bootstrap/source/delphi-markdown | ||
| FHIRSERVER_LOCATIONS_SNOMED_CACHE_PATH: /terminology/fhir-server/snomed.test.cache | ||
| FHIRSERVER_MYSQL_SERVER: mysql | ||
| FHIRSERVER_EMAIL_SENDER: [email protected] | ||
| FHIRSERVER_EMAIL_DESTINATION: [email protected] | ||
| FHIRSERVER_EMAIL_PASSWORD: ${{ secrets.FHIRSERVER_EMAIL_PASSWORD }} | ||
| FHIRSERVER_SSL_CERT_PATH: /work/fhirserver/fixtures/domain.crt | ||
| FHIRSERVER_SSL_KEY_PATH: /work/fhirserver/fixtures/domain.key | ||
| FHIRSERVER_SSL_CACERT_PATH: /work/fhirserver/fixtures/rootCA.crt | ||
| FHIRSERVER_SSL_PASSWORD: password | ||
| run: | | ||
| cat fixtures/test-settings.ini.template | envsubst > ~/test-settings.ini | ||
| # Step 7: Ensure SNOMED cache is present | ||
| - name: Ensure SNOMED cache is present | ||
| run: | | ||
| mkdir -p ~/terminology/fhir-server | ||
| wget -q --no-clobber https://storage.googleapis.com/ig-build/snomed.test.cache -O ~/terminology/fhir-server/snomed.test.cache || true | ||
| ls ~/terminology/fhir-server/snomed.test.cache | ||
| # Step 8: Push the Docker image to GitHub Container Registry (GHCR) | ||
| - name: Push Docker image to GHCR | ||
| run: | | ||
| docker push ghcr.io/${{ github.repository_owner }}/fhirserver:nightly |
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