High-performance Automated Next-generation AllHiC.
- A C++ compiler supports C++11 standards. (GCC >= 4.8.1, MSVC >= 19.0, Clang >= 3.0)
- Python >= 3.6
- CMake >= 2.8
- zlib-devel
HANA contains the basic C++ binaries and Python libraries for pipeline and advanced framework features. To install the HANA binaries
python hana_install.py -i /path/to/bin
To install the Python library
pip install hana_scaffold
For advanced options, please check Compile & Install.
HANA supports Python automated scaffold pipeline and directly using the binaries for bash script or other pipeline.
To use HANA Python pipeline, please check Usage (Python Pipeline).
To use HANA standard module directly, please check Usage (Binaries).