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@HMS-IAC

Image Analysis Collaboratory

Welcome

Welcome to the repository of the Image Analysis Collaboratoy at Harvard Medical School.
Here, you will find code, teaching material, and documentation for public projects.
Please navigate to the list of repositories to see what is available.

Popular repositories Loading

  1. qupath-workshop qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    3 1

  2. .github .github Public

    About

    2

  3. Bioimage-Analysis-on-O2 Bioimage-Analysis-on-O2 Public

    Documentation page

    HTML 2

  4. BIA-QC BIA-QC Public

    Forked from rkarmaka/BIA-QC

    Quality control for bioimage analysis

    Python 1

  5. stroma-spatial-analysis stroma-spatial-analysis Public

    An image analysis pipeline for quantifying the spatial distribution of cell markers in stroma-rich tumors

    Jupyter Notebook

  6. workshop-template workshop-template Public template

    Sphinx template to host workshop materials with versioning support.

Repositories

Showing 10 of 10 repositories
  • fiji-exercises-collection Public

    This is a collection of exercises for the open-source Fiji software.

    HMS-IAC/fiji-exercises-collection’s past year of commit activity
    JavaScript 0 1 0 0 Updated Jan 16, 2025
  • qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    HMS-IAC/qupath-workshop’s past year of commit activity
    3 CC-BY-4.0 1 0 0 Updated Jan 16, 2025
  • fiji-workshop Public

    Materials supporting the ImageJ/Fiji workshop at Harvard Medical School.

    HMS-IAC/fiji-workshop’s past year of commit activity
    0 CC-BY-4.0 2 0 0 Updated Jan 9, 2025
  • fiji-macro-workshop Public

    Materials supporting the Fiji Macro workshop at Harvard Medical School.

    HMS-IAC/fiji-macro-workshop’s past year of commit activity
    0 CC-BY-4.0 0 0 0 Updated Jan 8, 2025
  • HMS-IAC/SAM-using-Python-for-Microscopy-Data’s past year of commit activity
    Jupyter Notebook 0 MIT 3 0 0 Updated Nov 8, 2024
  • Bioimage-Analysis-on-O2 Public

    Documentation page

    HMS-IAC/Bioimage-Analysis-on-O2’s past year of commit activity
    HTML 2 0 0 0 Updated Oct 19, 2024
  • BIA-QC Public Forked from rkarmaka/BIA-QC

    Quality control for bioimage analysis

    HMS-IAC/BIA-QC’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Oct 19, 2024
  • workshop-template Public template

    Sphinx template to host workshop materials with versioning support.

    HMS-IAC/workshop-template’s past year of commit activity
    0 CC-BY-4.0 0 0 0 Updated Oct 4, 2024
  • stroma-spatial-analysis Public

    An image analysis pipeline for quantifying the spatial distribution of cell markers in stroma-rich tumors

    HMS-IAC/stroma-spatial-analysis’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 18, 2024
  • .github Public

    About

    HMS-IAC/.github’s past year of commit activity
    2 0 0 0 Updated Jun 15, 2024

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