checked!

Gregor-Mendel-Institute · Nov 16, 2016 · cce3d0e · cce3d0e
1 parent e9a9511
commit cce3d0e
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Showing 3 changed files with 1 addition and 1 deletion.
diff --git a/snpmatch/__init__.pyc b/snpmatch/__init__.pyc
diff --git a/snpmatch/core/snpmatch.py b/snpmatch/core/snpmatch.py
@@ -129,7 +129,7 @@ def parseInput(args):
   else:
     die("file extension not valid!")
   snpst = np.unique(snpCHR, return_counts=True)
-  snpdict = dict((snpst[0][i], snpst[1][i]) for i in range(len(snpst[0])))
+  snpdict = dict(('Chr%s' % snpst[0][i], snpst[1][i]) for i in range(len(snpst[0])))
   with open(args['outFile'] + ".stats.json", "w") as out_stats:
     out_stats.write(json.dumps(snpdict))
   log.info("writing output into file: %s", args['outFile'] + ".npz")

diff --git a/snpmatch/core/snpmatch.pyc b/snpmatch/core/snpmatch.pyc