changed README!

README.md

@@ -16,7 +16,7 @@ pip install SNPmatch
 
 ### Requirements
 
-The snpmatch uses various python packages (numpy, pandas, pygwas, vcfnp). The main SNP database should be a HDF5 file with specific keys. Mainly read using pygwas package.
+The SNPmatch uses various python packages (numpy, pandas, pygwas, vcfnp). The main SNP database should be a HDF5 file with specific keys. Mainly read using pygwas package.
 
 ### Input files
 
@@ -47,6 +47,8 @@ SNPmatch can be run as bash commands given below. A detailed manual for each com
 ```bash
 snpmatch inbred -i input_file -d db.hdf5 -e db.acc.hdf5 -o output_file
 snpmatch cross -i input_file -d db.hdf5 -e db.acc.hdf5 -o output_file -s score_file
+# the SNPmatch parser
+snpmatch parser -i intput_file -o output_npz 
 ```
 
 
@@ -71,6 +73,3 @@ SNPmatch can be run directly for A. thaliana researchers as a web tool, [AraGeno
 
 - Rahul Pisupati (rahul.pisupati[at]gmi.oeaw.ac.at) 
 - Ümit Seren (uemit.seren[at]gmi.oeaw.ac.at)
-
-## License
-MIT license

setup.py

@@ -5,17 +5,17 @@
 here = path.abspath(path.dirname(__file__))
 
 # Get the long description from the relevant file
-with open(path.join(here, 'README.rst'), encoding='utf-8') as f:
+with open(path.join(here, 'README.md'), encoding='utf-8') as f:
     long_description = f.read()
 
 setup(
     name='SNPmatch',
     version='1.7.0',
-    description='A tool to get maximum likely accession in database',
+    description='A simple python library to identify the most likely strain given the SNPs for a sample',
     long_description=long_description,
-    url='https://github.com/Gregor-Mendel-Institute/snpmatch',
+    url='https://github.com/Gregor-Mendel-Institute/SNPmatch',
     author=['Rahul Pisupati'],
-    author_email='rahul.[email protected]',
+    author_email='rahul.[email protected]',
     license='GMI',
     classifiers=[
         'Development Status :: 5 - Production/Stable',