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Script for summarizing nhmmscan amplicon seq profiling

akiledalpushed 1 commit to main • 943575c…b4b3315 • 
on Nov 25, 2024

Update metaT rules

akiledalpushed 1 commit to main • ca7b0fd…943575c • 
on Sep 24, 2024

Cleanup postgres loading NB

akiledalpushed 2 commits to main • a17f944…ca7b0fd • 
on Sep 11, 2024

Add deepARG rule

akiledalpushed 1 commit to main • 286f885…a17f944 • 
on Aug 31, 2024

Update CoverM version & use TMPDIR

akiledalpushed 2 commits to main • 58e02d9…286f885 • 
on Aug 19, 2024

Add Microcystis marker gene mapping

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akiledalforce pushed to main • 4c9d02e…58e02d9 • 
on Jul 10, 2024

Add Microcystis marker gene mapping

akiledalpushed 1 commit to main • 0b0bcfd…4c9d02e • 
on Jul 10, 2024

Add contig abundances to postgres

akiledalpushed 1 commit to main • dd3354e…0b0bcfd • 
on Jun 18, 2024

add postgres loading notebook

akiledalpushed 1 commit to main • adc9f8c…dd3354e • 
on Jun 11, 2024

export TPM files for website

akiledalpushed 1 commit to main • c1c1cb6…adc9f8c • 
on Mar 20, 2024

Update rulegraph image

akiledalpushed 2 commits to main • 8e377b0…c1c1cb6 • 
on Mar 6, 2024

Update conda env definitions

akiledalpushed 1 commit to main • c1e5f5d…8e377b0 • 
on Mar 1, 2024

Clean up import status checks

akiledalpushed 1 commit to main • 4401f90…c1e5f5d • 
on Oct 3, 2023

add script to check import status and write import log

akiledalpushed 1 commit to main • f7203e3…4401f90 • 
on Oct 2, 2023

Improve handling when no quality bins are produced

akiledalpushed 3 commits to main • ab46ead…f7203e3 • 
on Oct 2, 2023

Sync recent changes

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akiledalforce pushed to main • dea990a…ab46ead • 
on Mar 10, 2023