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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 120 17

  2. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 181 6

  3. polygraph polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 28

  4. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 256 30

Repositories

Showing 10 of 113 repositories
  • beignet Public

    A standard library for biological research.

    Genentech/beignet’s past year of commit activity
    Python 21 MIT 5 31 19 Updated Apr 4, 2025
  • phase1b Public
    Genentech/phase1b’s past year of commit activity
    R 5 2 18 1 Updated Apr 3, 2025
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Genentech/decima’s past year of commit activity
    Jupyter Notebook 31 4 1 0 Updated Apr 2, 2025
  • Genentech/spex_segmentation’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 2, 2025
  • Genentech/spex_clustering’s past year of commit activity
    Python 0 0 0 0 Updated Apr 2, 2025
  • spex Public
    Genentech/spex’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Apr 2, 2025
  • pascient Public
    Genentech/pascient’s past year of commit activity
    Jupyter Notebook 12 2 0 0 Updated Apr 1, 2025
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
    R 17 4 54 (1 issue needs help) 1 Updated Apr 1, 2025
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 256 MIT 30 21 7 Updated Mar 31, 2025
  • polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Genentech/polygraph’s past year of commit activity
    Jupyter Notebook 28 MIT 0 1 0 Updated Mar 27, 2025

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