GavinHaLab
Cancer Genomics and Computational Biology Lab at Fred Hutch
- 34 followers
- FRED HUTCHINSON CANCER RESEARCH CENTER
- https://gavinhalab.org
- @gavinha
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Showing 10 of 34 repositories
- CRAMboozle Public
A snakemake workflow for CRAMboozle on Fred Hutch servers. CRAMboozle is a modified version of BAMboozle which de-identifies alignment data and takes either BAM or CRAM format for both input and output (CRAM to CRAM by default).
GavinHaLab/CRAMboozle’s past year of commit activity - PEARL Public
GavinHaLab/PEARL’s past year of commit activity - mutect2_snakemake Public Forked from annahoge/mutect2_snakemake
A snakemake to run Mutect2 on analysis-ready bams, following GATK best practices.
GavinHaLab/mutect2_snakemake’s past year of commit activity - Keraon Public Forked from denniepatton/Keraon
A tool for estimating heterogenous phenotype fractions from ctDNA features
GavinHaLab/Keraon’s past year of commit activity - BLCA-subtype-evolution-paper Public
GavinHaLab/BLCA-subtype-evolution-paper’s past year of commit activity - CRPC-docetaxel-cfDNA-paper Public
GavinHaLab/CRPC-docetaxel-cfDNA-paper’s past year of commit activity
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