These files allow for modelling of quorum sensing system to generate a input-output dose response curve and to carry out sensitivity analysis of model parameters on the input-output response curve.
Quorum Sensing Tra System07.sbproj - basic quorum sensing simbiology model
MH01_fit.m - this code generates the input-output response curve for the simbiology model named in the code
MH07 sensitivity analysis.m - this code carries out sensitivity analysis on Quorum Sensing Tra System07.sbproj
Quorum Sensing Tra System_tunedkbasal.sbproj - model to tune the input-output response curve altering kbasal parameter
Quorum Sensing Tra System_tunedbasal+translation.sbproj - model tuning input-output response curve by altering kbasal and ktranslationGFP
Quorum Sensing Tra System_tunedallparameters.sbproj - model tuning input-output response curve altering kbasal, ktranslationGFP and ktranscriptionTraR
rgb.m - code for colour of barcharts in MH07 sensitivity analysis