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Support FHIR R4B#508

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kennethmyhra wants to merge 132 commits intor4b/masterFirelyTeam/spark:r4b/masterfrom r4b-supportFirelyTeam/spark:r4b-supportCopy head branch name to clipboard

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Commits

Commits on Oct 13, 2022

• Engine: Use HttpRequestFeature.Path instead of RawTarget

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Commits on Oct 24, 2022

• workflows: Upgrade GitHub actions to latest

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• deps: Upgrade Microsoft.AspNetCore.* from 6.0.9 to 6.0.10

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• deps: Upgrade Microsoft.EntityFrameworkCore.Sqlite from 6.0.9 to 6.0.10

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• deps: Upgrade Microsoft.NET.Test.Sdk from 17.3.1 to 17.3.2

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• deps: Upgrade NuGet.Versioning from 6.3.0 to 6.3.1

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• deps: Upgrade MongoDB.* from 2.17.1 to 2.18.0

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• Solution: Remove VS specific targets

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• deps: Upgrade Microsoft.Extensions.Logging.Abstractions 2.0.0 -> 3.1.30

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• deps: Upgrade ZstdSharp.Port from 0.6.2 to 0.6.4

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• deps: Upgrade DnsClient from 1.6.1 to 1.7.0

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• deps: Upgrade bootstrap from 5.2.1 to 5.2.2

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• deps: Upgrade Hl7.Fhir.* from 4.2.1 to 4.3.0

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Commits on Nov 29, 2022

• build(deps): bump minimatch in /src/Spark.Web/ClientApp

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Commits on Dec 6, 2022

• deps: Upgrade Autofac from 6.4.0 to 6.5.0

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• deps: Upgrade Microsoft.*.EntityFrameworkCore" from 6.0.10 to 6.0.11

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• deps: Upgrade Microsoft.AspNetCore.Identity.UI 6.0.10 -> 6.0.11

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• deps: Upgrade Microsoft.EntityFrameworkCore.Sqlite 6.0.10 -> 6.0.11

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• deps: Upgrade Microsoft.NET.Test.Sdk 17.3.2 -> 17.4.0

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• deps: Upgrade Micros*.DependencyInjection.Abstractions 3.1.29 -> 3.1.31

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• deps: Upgrade Newtonsoft.Json 13.0.1 -> 13.0.2

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• deps: Upgrade NuGet.Versioning 6.3.1 -> 6.4.0

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• deps: Upgrade SharpZipLib 1.4.0 -> 1.4.1

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• deps: Upgrade ZstdSharp.Port 0.6.4 -> 0.6.5

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• deps: Upgrade jquery 3.6.0 -> 3.6.1

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Commits on Dec 17, 2022

• support _elements

  

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• add mandatory and modifier elements

  

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• Remove breaking change

  

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• Remove unnecessary using

  

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Commits on Jan 11, 2023

• deps: Upgrade Microsoft.*.Identity.EntityFrameworkCore 6.0.11 -> 6.0.13

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• deps: Upgrade Microsoft.AspNetCore.Identity.UI 6.0.11 -> 6.0.13

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• deps: Upgrade Microsoft.EntityFrameworkCore.Sqlite 6.0.11 -> 6.0.13

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• deps: Upgrade *.DependencyInjection.Abstractions 3.1.31 -> 3.1.32

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• deps: Upgrade Microsoft.NET.Test.Sdk 17.4.0 -> 17.4.1

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• deps: Upgrade Moq 4.18.2 -> 4.18.3

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• deps: Upgrade Swashbuckle.AspNetCore 6.4.0 -> 6.5.0

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• dist: Bump version number to 1.5.15

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Commits on Jan 26, 2023

• Search: Combine system and code using 'and' not 'or' for 'not' modifier

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Commits on Feb 4, 2023

• build(deps): bump http-cache-semantics in /src/Spark.Web/ClientApp

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Commits on Mar 6, 2023

• build(deps): bump MongoDB.Driver in /src/Spark.Mongo

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• build(deps): bump MongoDB.Driver in /src/Spark-Legacy

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Commits on Mar 14, 2023

• build(deps-dev): bump webpack in /src/Spark.Web/ClientApp

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  authored and

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  e03fc18

• deps: Upgrade Microsoft.*.Identity.EntityFrameworkCore 6.0.13 -> 6.0.15

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• deps: Upgrade Microsoft.AspNetCore.Identity.UI 6.0.13 -> 6.0.15

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• deps: Upgrade Microsoft.EntityFrameworkCore.Sqlite 6.0.13 -> 6.0.15

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• deps: Upgrade Microsoft.NET.Test.Sdk 17.4.1 -> 17.5.0

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• deps: Upgrade MSTest.{TestAdapter,TestFramework} 2.2.10 -> 3.0.2

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• deps: Upgrade NuGet.Versioning 6.4.0 -> 6.5.0

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• dist: Bump version to 1.5.16

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Commits on Apr 15, 2023

• Engine: Remove unnecessary empty line

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• Engine: Externalize entry if State == EntryState.{Undefined,Internal}

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• Engine: Internalize entry if State == EntryState.{Undefined,External}

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• Engine: Remove empty else-statement.

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• Engine: Remove unused method Assert from InteractionExtensions

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• Engine: Remove unused method Replace() in InteractionExtensions

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• Engine: Remove out commented code in InteractionExtensions

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  3b94823

• Engine: Extract and rename extension method ExtractMeta()

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• Engine: Add extension methods for the Coding data type

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• Engine: Add extension methods for the Meta data type

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• Engine: Implement operation meta-add properly for STU3 and R4

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• Engine: Remove the Extension methods and file HttpFhirTagExtensions

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Commits on Apr 16, 2023

• Meta: Remove disclaimer section

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  b62aae1

• deps: Upgrade MongoDB.DRvier 2.19.0 -> 2.19.1

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• deps: Upgrade Microsoft.*.Identity.EntityFrameworkCore 6.0.15 -> 6.0.16

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• deps: Upgrade Microsoft.AspNetCore.Identity.UI 6.0.15 -> 6.0.16

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• deps: Upgrade Microsoft.EntityFrameworkCore.Sqlite 6.0.15 -> 6.0.16

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Commits on May 21, 2023

• Engine+Mongo: Match any element where [system] match identifier

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• Engine: Use object intializers to make TokenValue.Parse() more readable

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• Engine: Move *.DependencyInjection.Abstractions to common <ItemGroup>

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  a008c19

• Tests: Broken tests after refactor of TokenValue

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  d586ee7

• deps: Upgrade NuGet.Versioning 6.5.0 -> 6.6.0

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  fdd71df

• Tests: Upgrade Microsoft.NET.Test.Sdk 17.50 -> 17.6.0

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  a9ee3ce

• Tests: Correct TokenValue input so expected value asserts successfully

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  b68814b

• Tests: Remove ElementMapTest

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  bba7bd1

• Tests: Amend expectation argument of Can_Build_TokenQuery_Filter

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• Engine: Avoid adding extra '/' constructing Bundle.link urls

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• Engine: Use conditional operator instead of if/else statement

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Commits on May 30, 2023

• dist: Bump version to 1.5.17

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Commits on Aug 25, 2023

• build(deps): bump tough-cookie and node-sass in /src/Spark.Web/ClientApp

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• build: Remove myget.org reference in NuGet.config

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• build: Remove NuGet.config entirely

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Commits on Aug 27, 2023

• build: Remove references to netcoreapp3.1

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• docs: Remove references to netcoreapp3.1

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• Engine: Rename FhirModelExtensions to BundleExtensions

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Commits on Sep 10, 2023

• Meta: Remove code style rule private_method_should_be_camelcase

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  f500d6b

• Engine: Return FHIR version from SparkSettings.FhirRelease

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Commits on Sep 11, 2023

• Mongo: Add GuidGenerator a new unique identity generator

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  8b1f878

• Mongo: Wire up GuidGenerator the new unique Id generator

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  2722503

• Meta: Update the backup image of spark example database

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• Documentation: Start documenting migration process from v1 to v2

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• Mongo: Add copyright header to IServiceCollectionExtensions.cs

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• Meta: Add dependabot configuration to update NuGet and GitHub actions

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• build(deps): bump yuzutech/annotations-action from 0.1.0 to 0.4.0

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• build(deps): bump actions/checkout from 3 to 4

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  dependabot[bot]

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• build(deps): bump jQuery from 3.6.1 to 3.7.1

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• build(deps): bump actions/upload-artifact from 2 to 3

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• build(deps): bump bootstrap from 5.2.2 to 5.3.1

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  dependabot[bot]

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• build(deps): bump Autofac from 6.5.0 to 7.1.0

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  dependabot[bot]

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  9988348

• build(deps): bump Fhir.Metrics from 1.2.1 to 1.2.2

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  dependabot[bot]

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• Engine: Better resolve handling for search parameters of type reference

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• Engine: Wire up ResourceResolver to our IndexService

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• Meta: Update backup image of spark example database

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  6fa5d32

• Documentation: Add note on rebuilding the index

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  f4b3bab

• Documentation: Reformat MigrateFromv1Tov2.md

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  b74b1b5

• Meta: Add MigrateFromv1Tov2.md to the docs section in the solution file

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• Engine: Null check arguments passed to IndexService's constructor

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Commits on Sep 12, 2023

• build(deps): bump SharpZipLib from 1.4.1 to 1.4.2

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  dependabot[bot]

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  committed
  43d2cdf

• build(deps): bump MSTest.TestFramework from 3.0.2 to 3.1.1

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  dependabot[bot]

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  6114594

• build(deps): bump ZstdSharp.Port from 0.6.5 to 0.7.2

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  dependabot[bot]

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• build(deps): bump SharpCompress from 0.32.2 to 0.33.0

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• Meta: Add dependabot.yml to the .github section of the solution file

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Commits on Sep 13, 2023

• build(deps): bump MSTest.TestAdapter from 3.0.2 to 3.1.1

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  dependabot[bot]

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• build(deps): bump Snappier from 1.0.0 to 1.1.1

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  dependabot[bot]

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  e51bf88

• deps: Bump *.AspNetCore.Identity.EntityFrameworkCore 6.0.16 -> 6.0.22

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  6160de8

• deps: Bump Microsoft.AspNetCore.Identity.UI 6.0.16 -> 6.0.22

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  fbdfcf3

• deps: Bump Microsoft.EntityFrameworkCore.Sqlite 6.0.16 -> 6.0.22

  kennethmyhra

  committed
  8a51036

• deps: Bump Microsoft.NET.Test.Sdk 17.6.0 -> 17.7.2

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  committed
  64b69e2

• deps: Bump MongoDB.Driver 2.19.1 -> 2.21.0

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  committed
  047a96b

• deps: Bump Moq 4.18.4 -> 4.20.69

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  06aece7

• deps: Bump NuGet.Versioning 6.6.0 -> 6.7.0

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• deps: Bump xunit and xunit.runner.visualstudio 2.4.5 -> 2.5.0

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Commits on Sep 14, 2023

• build(deps): bump MongoDB.Bson from 2.18.0 to 2.21.0

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  dependabot[bot]

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• build(deps): bump MongoDB.Libmongocrypt from 1.6.0 to 1.8.0

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  dependabot[bot]

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• build(deps): bump MongoDB.Driver from 2.19.0 to 2.21.0

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  dependabot[bot]

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• Store.Sql: Remove Spark.Store.Sql{.Tests}

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• Spark-Legacy: Remove Spark-Legacy the original Spark UI

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• Meta: Remove no longer necessary solution files

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• Engine: Rename IGenerator to IIdentityGenerator

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• Mongo: Rename GuidGenerator to GuidIdentityGenerator

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• Documentation: Add note about rename of IGenerator to IIdentityGenerator

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• workflows: Add linux (ubuntu-latest) as run target to CI

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• Everywhere: Support FHIR R4B

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