CUBE - version 6.6.0

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.6.0

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.6.0

What's Changed

• PACS with sse by @chhsiao1981 in #655
• PACS: permission_classes in PACSFileProgressSSE by @chhsiao1981 in #656

Full Changelog: v6.5.0...v6.6.0

CUBE - version 6.4.1

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.4.1

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.4.1

What's Changed

• change granian to uvicorn by @chhsiao1981 in #647

Full Changelog: v6.4.0...v6.4.1

CUBE - version 6.4.0

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.4.0

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.4.0

What's Changed

• Make delete requests to pfcon more robust and add periodic task to retry failed requests by @jbernal0019 in #633
• Replace healthcheck CMD with CMD-SHELL by @jennydaman in #634
• Make is_staff user attribute read-only and delete leftover file in storage when exception is raised by @jbernal0019 in #641
• Pass user's auth token to plugins as env variable by @jbernal0019 in #642

Full Changelog: v6.3.3...v6.4.0

CUBE - version 6.3.3

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.3

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.3

What's Changed

• Allow new files and folders added to a shared folder to be automatically seen by @jbernal0019 in #632

Full Changelog: v6.3.2...v6.3.3

CUBE - version 6.3.2

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.2

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.2

What's Changed

• Optimize computation of jobs status forfeeds querysets by @jbernal0019 in #628
• Optimize computation of jobs status for workflows querysets by @jbernal0019 in #629

Full Changelog: v6.3.1...v6.3.2

CUBE - version 6.3.1

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.1

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.1

What's Changed

• Add DATABASE_CONN_POOL env variables and upgrade all python libraries by @jbernal0019 in #627

Full Changelog: v6.3.0...v6.3.1

CUBE - version 6.3.0

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.0

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.0

What's Changed

• Add automated tests for the new moving/renaming functionality for filebrowser's folders, files and link files by @jbernal0019 in #571
• PACSSeries registration over celery task and WebSockets for streaming DICOM receive progress messages by @jennydaman in #572
• Fix bugs related to the parent folder of a plugin instance's output dir by @jbernal0019 in #574
• Censor error message and change LonkWsSubscription by @jennydaman in #575
• LONK-WS: prevent duplicate subscription and implement unsubscription by @jennydaman in #576
• Fix internal server error when uploading or moving files to a shared folder by @jbernal0019 in #577
• Filter out healthcheck logging and properly raise exceptions in DEBUG mode by @jennydaman in #578
• Add drf-spectacular for OpenAPI generation by @jennydaman in #579
• Remove all vnd.collection+json content from OpenAPI spec by @jennydaman in #580
• Set PluginInstanceRequest.additionalProperties={} by @jennydaman in #581
• Manually add previous_id to OpenAPI PluginInstanceRequest by @jennydaman in #582
• Clean up storage after FileBrowserViewTests by @jennydaman in #583
• Fix all spectacular warnings and add OpenAPI spec to release draft by @jennydaman in #584
• Fix OpenAPI spec of PluginInstance nullable fields previous, previous_id, workflow by @jennydaman in #585
• Replace daphne with granian by @jennydaman in #588
• Implement PACS list API endpoint based on a new PFDCM microservice by @jbernal0019 in #589
• Add pipeline_id and pipeline_name filters to pipeline source files searches by @jbernal0019 in #590
• Remove constraint that prevented forward slashes in a feed's name by @jbernal0019 in #591
• Disable user acct creation endpoint post if DISABLE_USER_ACCOUNT_CREATION variable is set to True by @jbernal0019 in #592
• Add env variables AUTH_LDAP_GROUP_SEARCH_ROOT for LDAP group mirroring and AUTH_LDAP_CHRIS_ADMIN_GROUP to define a ChRIS admin group by @jbernal0019 in #593
• Add pacs_users to the groups managed by LDAP for LDAP users by @jbernal0019 in #594
• Implement PACS query API endpoint by @jbernal0019 in #595
• Allow any CORS on api/v1/plugins/ and api/v1/plugins/metas/ by @jennydaman in #597
• Implement PACS retrieve API endpoint by @jbernal0019 in #598
• Add more optional environment variables for LDAP by @jennydaman in #599
• Implement async scheduling of PACS query operation by @jbernal0019 in #600
• Update admin site to use the new UserProxy model instead of the User model by @jbernal0019 in #606
• Add protection against files/folders with paths that contain commas by @jbernal0019 in #609
• CORS_EXPOSE_HEADERS = ('Allow',) by @jennydaman in #610
• Fix bug happening when folders were shared twice by @jbernal0019 in #612
• Add Content-Disposition header to file downloads by @jbernal0019 in #614
• Fix issue that prevented deletion of a folder's descendant folders when the raw storage was a POSIX filesystem by @jbernal0019 in #615
• Upgrade to Django 5.1.7 by @jbernal0019 in #616
• Add type filter to plugin instances and name_exact filter to pipelines by @jbernal0019 in #617
• Enable empty file uploads and searching plugins by public repo by @jbernal0019 in #618
• Fix and merge jennydaman-remove-make.sh branch by @jbernal0019 in #619
• Remove make.sh by @jennydaman in #570
• Fix production build by @jbernal0019 in #620
• Fix production build by @jbernal0019 in #621
• Increase pacs_name to 100 characters long by @jbernal0019 in #622
• Make fields read-only in the serializers' constructors by @jbernal0019 in #624
• Improve speed of DB queries related to granting a user permission to accesss folder/files resources by @jbernal0019 in #625
• Fix UserProxy model by @jbernal0019 in #626

Full Changelog: 6.2.0...v6.3.0

CUBE - version 6.3.0-beta.8

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.0-beta.8

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.0-beta.8

What's Changed

• Implement async scheduling of PACS query operation by @jbernal0019 in #600
• Update admin site to use the new UserProxy model instead of the User model by @jbernal0019 in #606
• Add protection against files/folders with paths that contain commas by @jbernal0019 in #609
• CORS_EXPOSE_HEADERS = ('Allow',) by @jennydaman in #610

Full Changelog: v6.3.0-beta.7...v6.3.0-beta.8

CUBE - version 6.3.0-beta.7

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.0-beta.7

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.0-beta.7

What's Changed

• Implement PACS retrieve API endpoint by @jbernal0019 in #598
• Add more optional environment variables for LDAP by @jennydaman in #599

Full Changelog: v6.3.0-beta.6...v6.3.0-beta.7

CUBE - version 6.3.0-beta.6

Getting the Image

Using Podman:

podman pull ghcr.io/fnndsc/cube:6.3.0-beta.6

Using Docker:

docker pull ghcr.io/fnndsc/cube:6.3.0-beta.6

What's Changed

• Implement PACS list API endpoint based on a new PFDCM microservice by @jbernal0019 in #589
• Add pipeline_id and pipeline_name filters to pipeline source files searches by @jbernal0019 in #590
• Remove constraint that prevented forward slashes in a feed's name by @jbernal0019 in #591
• Disable user acct creation endpoint post if DISABLE_USER_ACCOUNT_CREATION variable is set to True by @jbernal0019 in #592
• Add env variables AUTH_LDAP_GROUP_SEARCH_ROOT for LDAP group mirroring and AUTH_LDAP_CHRIS_ADMIN_GROUP to define a ChRIS admin group by @jbernal0019 in #593
• Add pacs_users to the groups managed by LDAP for LDAP users by @jbernal0019 in #594
• Implement PACS query API endpoint by @jbernal0019 in #595
• Allow any CORS on api/v1/plugins/ and api/v1/plugins/metas/ by @jennydaman in #597

Full Changelog: v6.3.0-beta.5...v6.3.0-beta.6