Skip to content
@FASTGenomics

FASTGenomics

FASTGenomics – The platform for single-cell transcriptomics

Pinned Loading

  1. fgread-r Public

    R readers for different data formats for FASTGenomics.

    R 1

  2. fgread-py Public

    Python readers for different data formats for FASTGenomics.

    Python 1 1

  3. test-environment Public

    Documentation how to run FASTGenomics analysis on a local machine for testing

    1

  4. test-data Public

    Directory with data sets used for testing various notebooks outside of FG

    1

Repositories

Showing 10 of 13 repositories
  • image-texlive Public

    Texlive Docker Image

    Dockerfile 0 0 0 0 Updated Nov 3, 2023
  • jupyterswarmtemplate Public

    template for juypterswarm

    Jupyter Notebook 0 0 0 0 Updated Dec 13, 2021
  • analysis-fastresearch-python Public

    Intro notebook for new python analyses on fastresearch.

    Jupyter Notebook 0 0 0 0 Updated Oct 26, 2021
  • analysis-fastresearch-R Public

    Intro notebook for R analyses on fastresearch

    Jupyter Notebook 0 0 0 0 Updated Oct 26, 2021
  • image-jupyter-base Public

    Base image for the jupyter session

    Python 0 1 0 1 Updated Sep 28, 2021
  • image-shiny-base Public

    Base Image for R Shiny analyses on FASTGenomics

    R 1 MIT 0 0 0 Updated Aug 30, 2021
  • fgread-py Public

    Python readers for different data formats for FASTGenomics.

    Python 1 MIT 1 0 1 Updated Aug 13, 2021
  • fgread-r Public

    R readers for different data formats for FASTGenomics.

    R 1 MIT 0 0 0 Updated Mar 4, 2021
  • analysis_empty_scanpy_rpy2 Public

    Advanced scanpy environment with R support (rpy2)

    Jupyter Notebook 0 0 0 0 Updated Aug 13, 2020
  • analysis_empty_seurat Public
    Jupyter Notebook 0 0 0 0 Updated Aug 13, 2020
View all repositories