Updates to populate_hh_visit_plan_fns.jl

Support bubbles now count as a single household towards the three household limit in scenarios permitting mixing of three households on specified days. Figures files and MAT files regenerated.
EdMHill · Oct 2, 2022 · 61d5590 · 61d5590
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diff --git a/results/MAT_files/support_bubble_visit_plan_alternative_analysis.mat b/results/MAT_files/support_bubble_visit_plan_alternative_analysis.mat
diff --git a/results/MAT_files/support_bubble_visit_plan_alternative_analysis_lower_adherence.mat b/results/MAT_files/support_bubble_visit_plan_alternative_analysis_lower_adherence.mat
diff --git a/results/MAT_files/support_bubble_visit_plan_main_analysis.mat b/results/MAT_files/support_bubble_visit_plan_main_analysis.mat
diff --git a/results/MAT_files/support_bubble_visit_plan_main_analysis_lower_adherence.mat b/results/MAT_files/support_bubble_visit_plan_main_analysis_lower_adherence.mat
diff --git a/...lts/MAT_files/three_household_faithful_bubble_shorter_visit_plan_alternative_analysis.mat b/...lts/MAT_files/three_household_faithful_bubble_shorter_visit_plan_alternative_analysis.mat
diff --git a/...ree_household_faithful_bubble_shorter_visit_plan_alternative_analysis_lower_adherence.mat b/...ree_household_faithful_bubble_shorter_visit_plan_alternative_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_faithful_bubble_shorter_visit_plan_main_analysis.mat b/results/MAT_files/three_household_faithful_bubble_shorter_visit_plan_main_analysis.mat
diff --git a/...iles/three_household_faithful_bubble_shorter_visit_plan_main_analysis_lower_adherence.mat b/...iles/three_household_faithful_bubble_shorter_visit_plan_main_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_faithful_bubble_visit_plan_alternative_analysis.mat b/results/MAT_files/three_household_faithful_bubble_visit_plan_alternative_analysis.mat
diff --git a/...files/three_household_faithful_bubble_visit_plan_alternative_analysis_lower_adherence.mat b/...files/three_household_faithful_bubble_visit_plan_alternative_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_faithful_bubble_visit_plan_main_analysis.mat b/results/MAT_files/three_household_faithful_bubble_visit_plan_main_analysis.mat
diff --git a/...ts/MAT_files/three_household_faithful_bubble_visit_plan_main_analysis_lower_adherence.mat b/...ts/MAT_files/three_household_faithful_bubble_visit_plan_main_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_fixed_bubble_visit_plan_alternative_analysis.mat b/results/MAT_files/three_household_fixed_bubble_visit_plan_alternative_analysis.mat
diff --git a/...AT_files/three_household_fixed_bubble_visit_plan_alternative_analysis_lower_adherence.mat b/...AT_files/three_household_fixed_bubble_visit_plan_alternative_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_fixed_bubble_visit_plan_main_analysis.mat b/results/MAT_files/three_household_fixed_bubble_visit_plan_main_analysis.mat
diff --git a/results/MAT_files/three_household_fixed_bubble_visit_plan_main_analysis_lower_adherence.mat b/results/MAT_files/three_household_fixed_bubble_visit_plan_main_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_unfaithful_bubble_visit_plan_alternative_analysis.mat b/results/MAT_files/three_household_unfaithful_bubble_visit_plan_alternative_analysis.mat
diff --git a/...les/three_household_unfaithful_bubble_visit_plan_alternative_analysis_lower_adherence.mat b/...les/three_household_unfaithful_bubble_visit_plan_alternative_analysis_lower_adherence.mat
diff --git a/results/MAT_files/three_household_unfaithful_bubble_visit_plan_main_analysis.mat b/results/MAT_files/three_household_unfaithful_bubble_visit_plan_main_analysis.mat
diff --git a/.../MAT_files/three_household_unfaithful_bubble_visit_plan_main_analysis_lower_adherence.mat b/.../MAT_files/three_household_unfaithful_bubble_visit_plan_main_analysis_lower_adherence.mat
diff --git a/...infections_age_breakdown_violins_percentages_alternative_analysis_23Dec2020_27Dec2020.pdf b/...infections_age_breakdown_violins_percentages_alternative_analysis_23Dec2020_27Dec2020.pdf
diff --git a/..._infections_age_breakdown_violins_percentages_alternative_analysis_whole_time_horizon.pdf b/..._infections_age_breakdown_violins_percentages_alternative_analysis_whole_time_horizon.pdf
diff --git a/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_23Dec2020.pdf b/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_23Dec2020.pdf
diff --git a/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_24Dec2020.pdf b/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_24Dec2020.pdf
diff --git a/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_25Dec2020.pdf b/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_25Dec2020.pdf
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diff --git a/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_27Dec2020.pdf b/...s/new_latent_age_propn_of_age_grps_violins_percentages_alternative_analysis_27Dec2020.pdf
diff --git a/...e_analysis/newinf_percentage_age_grps_violins_alternative_analysis_whole_time_horizon.pdf b/...e_analysis/newinf_percentage_age_grps_violins_alternative_analysis_whole_time_horizon.pdf
diff --git a/...reakdown_violins_percentages_alternative_analysis_lower_adherence_23Dec2020_27Dec2020.pdf b/...reakdown_violins_percentages_alternative_analysis_lower_adherence_23Dec2020_27Dec2020.pdf
diff --git a/...breakdown_violins_percentages_alternative_analysis_lower_adherence_whole_time_horizon.pdf b/...breakdown_violins_percentages_alternative_analysis_lower_adherence_whole_time_horizon.pdf
diff --git a/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_23Dec2020.pdf b/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_23Dec2020.pdf
diff --git a/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_24Dec2020.pdf b/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_24Dec2020.pdf
diff --git a/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_25Dec2020.pdf b/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_25Dec2020.pdf
diff --git a/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_26Dec2020.pdf b/..._propn_of_age_grps_violins_percentages_alternative_analysis_lower_adherence_26Dec2020.pdf
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diff --git a/...f_percentage_age_grps_violins_alternative_analysis_lower_adherence_whole_time_horizon.pdf b/...f_percentage_age_grps_violins_alternative_analysis_lower_adherence_whole_time_horizon.pdf
diff --git a/...is/new_infections_age_breakdown_violins_percentages_main_analysis_23Dec2020_27Dec2020.pdf b/...is/new_infections_age_breakdown_violins_percentages_main_analysis_23Dec2020_27Dec2020.pdf
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diff --git a/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_23Dec2020.pdf b/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_23Dec2020.pdf
diff --git a/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_24Dec2020.pdf b/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_24Dec2020.pdf
diff --git a/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_25Dec2020.pdf b/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_25Dec2020.pdf
diff --git a/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_26Dec2020.pdf b/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_26Dec2020.pdf
diff --git a/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_27Dec2020.pdf b/...analysis/new_latent_age_propn_of_age_grps_violins_percentages_main_analysis_27Dec2020.pdf
diff --git a/...les/main_analysis/newinf_percentage_age_grps_violins_main_analysis_whole_time_horizon.pdf b/...les/main_analysis/newinf_percentage_age_grps_violins_main_analysis_whole_time_horizon.pdf
diff --git a/...s_age_breakdown_violins_percentages_main_analysis_lower_adherence_23Dec2020_27Dec2020.pdf b/...s_age_breakdown_violins_percentages_main_analysis_lower_adherence_23Dec2020_27Dec2020.pdf
diff --git a/...ns_age_breakdown_violins_percentages_main_analysis_lower_adherence_whole_time_horizon.pdf b/...ns_age_breakdown_violins_percentages_main_analysis_lower_adherence_whole_time_horizon.pdf
diff --git a/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_23Dec2020.pdf b/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_23Dec2020.pdf
diff --git a/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_24Dec2020.pdf b/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_24Dec2020.pdf
diff --git a/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_25Dec2020.pdf b/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_25Dec2020.pdf
diff --git a/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_26Dec2020.pdf b/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_26Dec2020.pdf
diff --git a/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_27Dec2020.pdf b/...ent_age_propn_of_age_grps_violins_percentages_main_analysis_lower_adherence_27Dec2020.pdf
diff --git a/...e/newinf_percentage_age_grps_violins_main_analysis_lower_adherence_whole_time_horizon.pdf b/...e/newinf_percentage_age_grps_violins_main_analysis_lower_adherence_whole_time_horizon.pdf
diff --git a/src/include_files_stochastic_householdIBM/populate_hh_visit_plan_fns.jl b/src/include_files_stochastic_householdIBM/populate_hh_visit_plan_fns.jl